| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1877 |
|---|
| Symbol | |
|---|
| ID | 6088514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 2082959 |
|---|
| End bp | 2083426 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641596948 |
|---|
| Product | 17 kDa surface antigen |
|---|
| Protein accession | YP_001720621 |
|---|
| Protein GI | 170024116 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3133] Outer membrane lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000000817006 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAGC CATTCGTCGC CGTTGCTATC GCTGTTGTTA CTCTGACCGG TTGCGCTAAC
AACAACACCT TATCAGGTGA TGTGTTCACC GCATCCCAGG CTAAGCAAGT ACAGACGGTG
AGTTACGGCA CATTGATTTC TGTTCGCCCG GTAACTATTC AGGGTGGTGA TGATAACAAC
GTAGTCGGTG CCATCGGTGG TGCTGTATTA GGTGGTTTCC TTGGTAATGC TGTTGGTGGT
GGTACAGGCC GTAGCTTGGC AACCGCAGCA GGCGCTGTTG CCGGCGGTAT TGCAGGGCAA
GGCGTTCAGG GAGCACTGAA CCGTACTGAT GGTGTGCAAC TGGAGATCCG TAAAGACGAC
GGCCAAACCA TTCTGGTCGT TCAGAAGCAA GGCCCAACTC AGTTCAGCGT CGGTCAACGT
GTCATGCTCG CCAATAGCGG CAGCACAATA ACCGTCAGCC CGCGTTGA
|
|---|
| Protein sequence | MIKPFVAVAI AVVTLTGCAN NNTLSGDVFT ASQAKQVQTV SYGTLISVRP VTIQGGDDNN
VVGAIGGAVL GGFLGNAVGG GTGRSLATAA GAVAGGIAGQ GVQGALNRTD GVQLEIRKDD
GQTILVVQKQ GPTQFSVGQR VMLANSGSTI TVSPR
|
|---|
| |