Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1852 |
Symbol | |
ID | 6088096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2057551 |
End bp | 2057973 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641596920 |
Product | cysteine desufuration protein SufE |
Protein accession | YP_001720596 |
Protein GI | 170024091 |
COG category | [R] General function prediction only |
COG ID | [COG2166] SufE protein probably involved in Fe-S center assembly |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000534736 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGGTT TGCCAGATAG AGATAAATTA ATTCGTAACT TTTCCCGCTG TTTAAATTGG GAAGAAAAAT ACCTGTACAT CATTGAACTC GGCGGGCAGT TAGCCCCGTT GACCGAACAA CAGCGCCACC CAGAGAATCT GATCTCCGGT TGCCAGAGTC AGGTCTGGAT CGCGATGACA TTGTCTGCTG AAGGCCATGT GATATTTGCC GGCGATAGCG ATGCTGCTAT CGTTAAAGGT CTGGTCGCCG TGGTATTCAT CCTTTATCAC GATTTAACAC CTCAACAGAT AATCTCTCTG GATGTGCGTC CATTCTTTGC TGATTTAGCG CTTAGCCAGC ATTTGACACC TTCACGCTCA CAAGGTCTGG AGGCGATGAT CCGCGCCATT CGCACTAAAG TTGCCAATTT ATCAGCGCAT TGA
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Protein sequence | MAGLPDRDKL IRNFSRCLNW EEKYLYIIEL GGQLAPLTEQ QRHPENLISG CQSQVWIAMT LSAEGHVIFA GDSDAAIVKG LVAVVFILYH DLTPQQIISL DVRPFFADLA LSQHLTPSRS QGLEAMIRAI RTKVANLSAH
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