Gene YPK_1852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1852 
Symbol 
ID6088096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2057551 
End bp2057973 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content48% 
IMG OID641596920 
Productcysteine desufuration protein SufE 
Protein accessionYP_001720596 
Protein GI170024091 
COG category[R] General function prediction only 
COG ID[COG2166] SufE protein probably involved in Fe-S center assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000534736 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGTT TGCCAGATAG AGATAAATTA ATTCGTAACT TTTCCCGCTG TTTAAATTGG 
GAAGAAAAAT ACCTGTACAT CATTGAACTC GGCGGGCAGT TAGCCCCGTT GACCGAACAA
CAGCGCCACC CAGAGAATCT GATCTCCGGT TGCCAGAGTC AGGTCTGGAT CGCGATGACA
TTGTCTGCTG AAGGCCATGT GATATTTGCC GGCGATAGCG ATGCTGCTAT CGTTAAAGGT
CTGGTCGCCG TGGTATTCAT CCTTTATCAC GATTTAACAC CTCAACAGAT AATCTCTCTG
GATGTGCGTC CATTCTTTGC TGATTTAGCG CTTAGCCAGC ATTTGACACC TTCACGCTCA
CAAGGTCTGG AGGCGATGAT CCGCGCCATT CGCACTAAAG TTGCCAATTT ATCAGCGCAT
TGA
 
Protein sequence
MAGLPDRDKL IRNFSRCLNW EEKYLYIIEL GGQLAPLTEQ QRHPENLISG CQSQVWIAMT 
LSAEGHVIFA GDSDAAIVKG LVAVVFILYH DLTPQQIISL DVRPFFADLA LSQHLTPSRS
QGLEAMIRAI RTKVANLSAH