| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1849 |
|---|
| Symbol | sufC |
|---|
| ID | 6089385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 2054199 |
|---|
| End bp | 2054945 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641596917 |
|---|
| Product | cysteine desulfurase ATPase component |
|---|
| Protein accession | YP_001720593 |
|---|
| Protein GI | 170024088 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component |
|---|
| TIGRFAM ID | [TIGR01978] FeS assembly ATPase SufC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.116243 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAGTA TTAAGAATTT AAAAGTTAGC GTTGAAGGTA ATGAAATCCT CAAAGGTTTA
GATCTGGAGA TCAAACCGGG TGAAGTACAC GCTATCATGG GGCCGAACGG CTCAGGGAAA
AGTACTTTAT CAGCGGCATT GGCAGGGCGT GAAGAGTATG AAGTCACCGA AGGTGAAGTC
ACTTTTAAAG GAAAAGACTT ACTCGAACTC GCGCCAGAAG ATCGTGCAGG GGAAGGTGTC
TTTTTGGCTT TCCAGTATCC GGTAGAAATC CCCGGTGTCA GTAACCATTT CTTCCTGCAA
ACCTCGGTTA ATGCCGTGCG TAAATATCGT CAGCAGGCGC CATTGGACCG CTTTGATTTC
TCTGATTTTA TTGAAGAAAA AATTGCCTTG CTGAAAATGC CAGCTGATTT GCTGACCCGC
TCGGTCAATG TGGGTTTCTC CGGTGGTGAG AAGAAACGTA ATGATATTCT GCAGATGGCA
GCATTAGAGC CTTCGTTGTG TATTCTGGAT GAGACAGATT CTGGGCTGGA TATTGATGCA
CTGAAAATCG TGGCCAATGG CGTTAACTCA CTGCGCAATG AGAACCGCTC ATTTATTATC
GTTACCCACT ACCAACGTAT TCTGGATTAC GTTAAACCTG ATTTCGTCCA TGTGTTGTAT
CAGGGGCGGA TCATTAAATC GGGTGATTTC ACGTTAGTGA AACAGTTGGA GGAGCAAGGC
TATGGCTGGC TTACCGACCA ACAGTAA
|
|---|
| Protein sequence | MLSIKNLKVS VEGNEILKGL DLEIKPGEVH AIMGPNGSGK STLSAALAGR EEYEVTEGEV
TFKGKDLLEL APEDRAGEGV FLAFQYPVEI PGVSNHFFLQ TSVNAVRKYR QQAPLDRFDF
SDFIEEKIAL LKMPADLLTR SVNVGFSGGE KKRNDILQMA ALEPSLCILD ETDSGLDIDA
LKIVANGVNS LRNENRSFII VTHYQRILDY VKPDFVHVLY QGRIIKSGDF TLVKQLEEQG
YGWLTDQQ
|
|---|
| |