Gene YPK_1842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1842 
Symbol 
ID6087469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2042008 
End bp2042829 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content48% 
IMG OID641596910 
Producthypothetical protein 
Protein accessionYP_001720586 
Protein GI170024081 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAAGAT GTGTATTTTA TATTTCGGAT GGTACCGCTA TCACCGCAGA AGTACTCGGC 
CATGCCGTGC TATCTCAATT CCCGATCAAC GTGACAACCT TTACGTTACC TTTTGTCGAG
AATGCCGCCC GCGCACAGTC AGTATGTAAA CAAATCAATG AAATATATCA GGATACAGGT
GTCAGGCCGC TTGTTTTCTA TTCGATAATA AGCCTCGAAG TACGGGAAAT TATTCAACGA
AGTGAAGGAT TTTGTCAGGA TATCGTGCAA GCACTGGTCG CACCATTACA AGGTGAGTTG
GGCGTACCAC CTCAACCAGT GCTAAACCGT ACCCACGGCT TAACCGAAAG TAATCTGGAT
AAGTACGATG CTCGCATTGC AGCCATTGAT TATGCCCTTG CCCATGATGA CGGTATTTCT
CTACGTAATC TGGATCAGGC TCAGGTTATC CTGCTAGGCG TTTCTCGTTG TGGTAAAACC
CCCACCAGCC TCTATCTCGC CATGCAATTT GGTATCCGGG CGGCGAACTA CCCGTTTATC
GCCGATGATA TGGACAATTT GCAACTTCCC GCCGCACTGA AGCCTTTTCA GCACAAACTC
TTTGGTTTGA CAATCAACCC TGAGCGGCTT GCGGCTATCC GTGAGGAGCG GCGCGAAAAC
AGCCGTTACG CCTCACTGCG CCAATGCAGG ATGGAAGTGG GGGAAGTGGA AGCCTTATTC
CGCAAAAATC AGATTCGCTA CCTAAACTCG ACCAACTACT CAGTCGAAGA GATTTCAACA
AAAATCCTGG ATATCTTAGG GATGAGTCGT CGGATGTTTT AA
 
Protein sequence
MERCVFYISD GTAITAEVLG HAVLSQFPIN VTTFTLPFVE NAARAQSVCK QINEIYQDTG 
VRPLVFYSII SLEVREIIQR SEGFCQDIVQ ALVAPLQGEL GVPPQPVLNR THGLTESNLD
KYDARIAAID YALAHDDGIS LRNLDQAQVI LLGVSRCGKT PTSLYLAMQF GIRAANYPFI
ADDMDNLQLP AALKPFQHKL FGLTINPERL AAIREERREN SRYASLRQCR MEVGEVEALF
RKNQIRYLNS TNYSVEEIST KILDILGMSR RMF