Gene YPK_1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1840 
Symbol 
ID6089298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2039173 
End bp2040636 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content49% 
IMG OID641596908 
Producthypothetical protein 
Protein accessionYP_001720584 
Protein GI170024079 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCCA GAATGGAATA CGCCCCTGAA TTCGATAACA GCTATGCGCG GCAGTTGAGT 
GGTTTTTACA CCCGCTTGCA ACCTACGCCA TTAAAAGGTG CCCGCTTGTT GTATCACAGC
AAACCTCTGG CGCAAGAGTT AGGGCTGGAT GCTCATTGGT TCACTGAACC AAAGACTGCT
GTGTGGGCGG GGGAAGCACT GTTACCCGGA ATGGAGCCGC TAGCGCAGGT GTATAGCGGC
CATCAATTTG GCATGTGGGC AGGGCAGCTT GGGGATGGCC GTGGGATCTT GTTAGGAGAA
CAGCGGCTTA ATGATGGCCG CTATATGGAT TGGCATTTAA AAGGCGCTGG ATTAACACCT
TATTCCCGTA TGGGGGATGG CCGGGCTGTC TTGCGTTCTG TGATACGTGA GTTTTTGGCC
TCCGAAGCAT TACACCATTT AGGTATTCCA ACCAGCCGTG CTCTGACAAT TGTGACTAGC
GATCATCCAA TCTACCGTGA GCAAACTGAA CGAGGCGCGA TGCTACTAAG GGTGGCGGAA
AGCCATATTC GCTTCGGTCA TTTCGAGCAT TTCTACTATC GGCAGCAACC TAAGCAAGTT
CAACAATTAG CGGATTATGT TATTGCCCGC CACTGGCCGC AGTGGGTGGG GCACCAAGAA
TGCTACCGAC TGTGGTTTAC GGATGTGGTA GAGCGAACCG CGCGTTTAAT GGCCCACTGG
CAAACCGTCG GGTTTGCTCA TGGTGTGATG AATACCGATA ATATGTCAAT TCTTGGCATT
ACTATGGATT ATGGCCCATT TGGTTTTCTC GATGACTATG TGCCTGGATA TATCTGTAAC
CACTCCGACC ATCAAGGGCG TTATGCTTAT GATAATCAGC CTGCCGTAGC GTTATGGAAT
TTGCATCGAT TGGGGCACGC GTTGTCAGGT TTAATGTCTG CTGACCAATT GCAGTTGGCG
CTAGAGGCTT ATGAACCGGC ACTTATGGTT GCTTATGGTG AACAGATGCG AGCCAAGTTA
GGTTTTCTTG AGCGTGACAG CCAAGATAAC GATTTGCTGA CAGGTTTGTT GAGTTTGATG
ATCAAAGAAG GCCGGGATTA TACCCGGACT TTCCGCTTAT TGAGCGAAGT TGAAGTACAC
TCTGCACAAT CGCCATTGCG GGATGACTTT ATCGATAGAG CCGCTTTTGA CGACTGGTAC
CGCCGTTATC GTTCACGGTT GCAGCAAGAA TCCATTGATG ATGATCAGCG CCAGCAATCG
ATGAAAGCGG CTAATCCTAA ATATATATTA CGTAATTATT TGGCTCAGCA GGCGATTACT
CAGGCAGAAA AAGATGATAT TCAGCCACTT CAGCGGTTGC ACCAGGCATT ACAGCAACCG
TTTACTGATC AACCTGAATT TGATGATTTA GCGGCGTTAC CCCCAGATTG GGGAAAACAC
CTCGAGATCT CTTGTTCCAG CTGA
 
Protein sequence
MKPRMEYAPE FDNSYARQLS GFYTRLQPTP LKGARLLYHS KPLAQELGLD AHWFTEPKTA 
VWAGEALLPG MEPLAQVYSG HQFGMWAGQL GDGRGILLGE QRLNDGRYMD WHLKGAGLTP
YSRMGDGRAV LRSVIREFLA SEALHHLGIP TSRALTIVTS DHPIYREQTE RGAMLLRVAE
SHIRFGHFEH FYYRQQPKQV QQLADYVIAR HWPQWVGHQE CYRLWFTDVV ERTARLMAHW
QTVGFAHGVM NTDNMSILGI TMDYGPFGFL DDYVPGYICN HSDHQGRYAY DNQPAVALWN
LHRLGHALSG LMSADQLQLA LEAYEPALMV AYGEQMRAKL GFLERDSQDN DLLTGLLSLM
IKEGRDYTRT FRLLSEVEVH SAQSPLRDDF IDRAAFDDWY RRYRSRLQQE SIDDDQRQQS
MKAANPKYIL RNYLAQQAIT QAEKDDIQPL QRLHQALQQP FTDQPEFDDL AALPPDWGKH
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