Gene YPK_1832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1832 
Symbol 
ID6088048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2030966 
End bp2031949 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content46% 
IMG OID641596900 
Productundecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase 
Protein accessionYP_001720576 
Protein GI170024071 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCACTAA ATGAACCAAT TAAGAAGGTC TCCATTGTTA TTCCTGTCTA TAACGAGCAA 
GAGAGCTTGC CAGCATTAAT AGACAGAACG ACGGCTGCCT GTAAATTACT TACACAAGCT
TATGAAATAA TTTTGGTTGA TGACGGTAGC AGCGACAATT CTACTGAGCT TTTGACTGCT
GCGGCAAATG ATCCTGATAG CCATATAATT GCGATTTTGC TAAACCGTAA TTATGGTCAA
CATTCCGCCA TTATGGCGGG ATTTAATCAG GTTAGCGGTG ATTTAATTAT TACACTTGAT
GCTGACTTAC AAAATCCGCC TGAAGAAATT CCACGTTTAG TTCATGTAGC AGAAGAGGGC
TATGACGTGG TTGGTACCGT GCGTGCTAAT CGCCAAGACT CCCTGTTCCG TAAAACCGCA
TCGCGTATGA TCAATATGAT GATCCAACGT GCTACAGGGA AATCAATGGG TGACTACGGC
TGCATGCTAC GAGCTTATCG ACGTCACATT GTTGAAGCAA TGTTACACTG TCACGAGCGC
AGTACGTTTA TCCCAATCCT CGCGAATACC TTCGCCCGGC GGACGACAGA GATTACGGTC
CATCACGCCG AGCGTGAATT TGGCAACTCC AAATATAGCC TGATGAGGCT TATCAATCTG
ATGTATGACC TGATCACCTG CCTGACAACG ACGCCGTTAC GTTTGTTAAG TCTGGTGGGG
AGTGCCATTG CTCTTTTGGG CTTCACTTTC TCAGTGCTGC TGGTGGCCTT ACGCTTGATC
TTTGGTCCTG AGTGGGCTGG CGGCGGCGTT TTTACACTCT TCGCCGTATT GTTCATGTTC
ATCGGTGCTC AGTTTGTTGG TATGGGGTTA CTTGGTGAAT ATATCGGTCG TATTTATAAC
GATGTGCGCG CTCGCCCACG TTACTTTGTT CAGAAAGTGG TCGGCGCGGA GCAGACCGAA
AATAATCAGG ATGTAGAAAA ATGA
 
Protein sequence
MSLNEPIKKV SIVIPVYNEQ ESLPALIDRT TAACKLLTQA YEIILVDDGS SDNSTELLTA 
AANDPDSHII AILLNRNYGQ HSAIMAGFNQ VSGDLIITLD ADLQNPPEEI PRLVHVAEEG
YDVVGTVRAN RQDSLFRKTA SRMINMMIQR ATGKSMGDYG CMLRAYRRHI VEAMLHCHER
STFIPILANT FARRTTEITV HHAEREFGNS KYSLMRLINL MYDLITCLTT TPLRLLSLVG
SAIALLGFTF SVLLVALRLI FGPEWAGGGV FTLFAVLFMF IGAQFVGMGL LGEYIGRIYN
DVRARPRYFV QKVVGAEQTE NNQDVEK