Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1805 |
Symbol | |
ID | 6088261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2006382 |
End bp | 2006714 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641596873 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001720549 |
Protein GI | 170024044 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.241802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATGT TCTTTATCAA TGATGAAACT CCTTGGGAAG AGTTAGGCAA TGGCATTAAA CGCAAAGTGA TGACATGGAG CGATGAGCTA ATGATGGTCT GCGTTCACTT TGAAAAAGGG GCTATTGGTG TCGCTCATAA ACACGATATC CATGACCAGA TTGCTTATGT TGCAGCAGGT AGCTTCGAAG TAGAGATTGA AGGGCAAAAA CGTATTTTGA AAGCAGGGGA TGCGTATCGT GCGGTGAAAA ATGAAATGCA CGGTGCAGTA TCGTTGGAAG ACAACAGCAT CTTGATTGAT ACTTTTACGC CTAAACGGGA TGATTTTCTC TAA
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Protein sequence | MKMFFINDET PWEELGNGIK RKVMTWSDEL MMVCVHFEKG AIGVAHKHDI HDQIAYVAAG SFEVEIEGQK RILKAGDAYR AVKNEMHGAV SLEDNSILID TFTPKRDDFL
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