Gene YPK_1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1796 
Symbol 
ID6087975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1995998 
End bp1996546 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content48% 
IMG OID641596864 
Producthypothetical protein 
Protein accessionYP_001720540 
Protein GI170024035 
COG category[R] General function prediction only 
COG ID[COG1988] Predicted membrane-bound metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGGGG AAGGACACCT TATTTTTTCT GTTGCCTGCG TTATTTTAGC CAAAAAAGTC 
GGTCTCACGC CGGAACTGGC ACATGGCGAT TGGTGGCATA TTATTCCCGG CGCCCTGCTG
ACCTCTCTGC TGCCAGATAT TGATCACCCA AAGTCAATCC TCGGCCAGCG GTTAAAGTGG
GTTTCTGTGC CTATTGCCCG CGTATTTGGT CACCGCGGAT TTACCCATAG CTTATTGGCG
GTGATTGCTG GCATTGCACT GTTTCAGGTA GATGCACCAT TGAATGGGGT GCTCCCCCCA
GATGTATTTC ATGCCATGAT AATAGGTTAT TTCAGCCATC TATTGGCCGA TATGATTACG
CCAGCCGGTG TGCCGCTATT GTGGCCCTGC CGCTGGCGTT TCAGTATTCC GCTATTGCGG
CCACAAAAAG GTAATCAATT AGAACGCGTA TTATGTGTTC TGTTAGTTTG TTTTTCCGTC
TACTGGCAAA CTGACACCAC CATCCCGTTG CTCTACTATA TGGAACAATT GAAAAGCTTT
AGGTTATGA
 
Protein sequence
MTGEGHLIFS VACVILAKKV GLTPELAHGD WWHIIPGALL TSLLPDIDHP KSILGQRLKW 
VSVPIARVFG HRGFTHSLLA VIAGIALFQV DAPLNGVLPP DVFHAMIIGY FSHLLADMIT
PAGVPLLWPC RWRFSIPLLR PQKGNQLERV LCVLLVCFSV YWQTDTTIPL LYYMEQLKSF
RL