| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1787 |
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| Symbol | |
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| ID | 6089494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1983606 |
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| End bp | 1984385 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641596855 |
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| Product | pili assembly chaperone |
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| Protein accession | YP_001720531 |
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| Protein GI | 170024026 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0172451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAGAA CGCTCCTTAC TATATTGTCC TTTTTAAGGA CAGTGCGACT CTTAACGACA
CTGACACTCT TAATATTATC GGTTGTGGCG ACTGTGGCTC GTGCTGAAGT GATGATCAGT
GGGACACGTG TTATTTATGA AGAGAAACAA CGTGAGGGGG TGGTAAAGGT TTCCAATACG
GGCGATATGC CGGTCCTGCT TCAGGCCTGG ATAGATAAAG GTGATGCGAA CGCACGCCCA
GAGGCTATCA AGGTGCCGTT TAGTGTAATC CCCCCAGTAG TACGTTTAGA CCCTAAAAGG
GATCAGACTA TTCGTCTTTT TCGCACTGAT GGTGGATTAA CGGCTGATCG TGAAACCCTA
TTTTGGTTTA ACTTATTAGA AGTCCCGCCA AAGCCAATCC AAAGTGCGGC TGGTGGTGAG
AACAAAATGC AATTGGCTTT CCGTACCAGA ATTAAAATGT TTTACCGCCC TGAAGGATTA
ACCGTATTAC CTGCGCAAGC GGCCAAGAGT CTCGCATTTT CAATGAAAGG CAATCAGATC
GTCATAAAGA ATGCCTCACC GTATTACATT ACCTTGAGAA AGCTAGAATT ACGCACGTCA
GAGAAAGGGC CTGTATTGGC TAATTTTACT AAAATCAATA ATAAAATGGT TGCCCCTTTT
AGTGAACTAA GCTTACCTAC GAGTGCAAAA GCATCGATCA ATAATTCGGC ACAAGTTTTT
TATTCTGTTA TTAATGATCA GGGCGGCGAA ACTCAAGGTA CGCAAAAACT GACCCAATAA
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| Protein sequence | MRRTLLTILS FLRTVRLLTT LTLLILSVVA TVARAEVMIS GTRVIYEEKQ REGVVKVSNT
GDMPVLLQAW IDKGDANARP EAIKVPFSVI PPVVRLDPKR DQTIRLFRTD GGLTADRETL
FWFNLLEVPP KPIQSAAGGE NKMQLAFRTR IKMFYRPEGL TVLPAQAAKS LAFSMKGNQI
VIKNASPYYI TLRKLELRTS EKGPVLANFT KINNKMVAPF SELSLPTSAK ASINNSAQVF
YSVINDQGGE TQGTQKLTQ
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