| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1786 |
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| Symbol | |
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| ID | 6088969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1982928 |
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| End bp | 1983470 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641596854 |
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| Product | fimbrial protein |
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| Protein accession | YP_001720530 |
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| Protein GI | 170024025 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000129696 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAAATTA AATCAAGCAA TGTGTTAATT GCAGCTTTCG CTGGCTTATT TATTGCCCAA
TCAGCATTTG CAGCCGATGG TACTATTACT ATTAACGGTA AAATTACTGA CACGACGTGT
GGTATCTCTG TTAATAATGG CACTAAAGAT GGCACCGTCA CATTGCCAGT TGTCTCTGCA
AGCGCATTAG ACGGCATTAA TTCTGTAGCG GGTACCACAC CTTTCAATAT CGTATTAACC
GGTTGTACTG GGGCGACAAT GGGTAATGCC TATGCTCATT TTGAACAGGG TACTACCGTA
GAAGCGTCTA CTGGTCGTTT GAATAACAGT GACATCGATG GTGCAACCGG CGTACAGGTT
CGTCTATTAG ACAAAAATAG TGCACCTATT GTGGTGGGTT CTGGCAACCA AGGTAATGTC
GTAGAAGATA TTTCTGGTGA TGGCGCGACA TTAAGCTATT ATGCACAATA TTATGCAAAT
GAAGCGAATG TCGAAGCAGG TTTGGTCGCG ACGAATGTCG ACTATACTAT TATTTATGAT
TAA
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| Protein sequence | MKIKSSNVLI AAFAGLFIAQ SAFAADGTIT INGKITDTTC GISVNNGTKD GTVTLPVVSA
SALDGINSVA GTTPFNIVLT GCTGATMGNA YAHFEQGTTV EASTGRLNNS DIDGATGVQV
RLLDKNSAPI VVGSGNQGNV VEDISGDGAT LSYYAQYYAN EANVEAGLVA TNVDYTIIYD
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