| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1781 |
|---|
| Symbol | |
|---|
| ID | 6087281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 1977528 |
|---|
| End bp | 1978025 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641596849 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001720525 |
|---|
| Protein GI | 170024020 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1956] GAF domain-containing protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.222367 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA CAGAATTCTA CGCGGAATTA AAACGTGACT TATGTGCCTT AGTTGCAGGT
GAAACGAATT TTATTGCCAC ACTGGCCAAT GCCAGTGCCT TGCTTTATGA ACGCCTTGAT
GGCTTGAATT GGGCTGGTTT CTACTTGGTC GATGGCAAAC AACTTGTACT CGGGCCTTTT
CAGGGAAAGA TTGCATGTGT GCGTATTCCG GTAGGAAAAG GGGTGTGTGG AACCGCAGTA
GCAGAAAACC GCGTTCAGCG GGTAGGTAAT GTGCATGCTT TCCCCGGTCA TATTGCCTGT
GATGCAGCAA GTAACGCTGA AATTGTGCTG CCAATCACTG TAAAGGGGAA AGTTATCGGC
ATTTTGGATA TTGATAGCAT TGTTTATGAT CGCTTTGATG AAGACGACGA ATTGGGTTTA
ATCTCAGTTG TGGCGGGGCT TTGCGAGCAT CTTGAGTTTT GTGATAGTGC CAAATATGTC
ACAGAGACTG CAAGTTGA
|
|---|
| Protein sequence | MKKTEFYAEL KRDLCALVAG ETNFIATLAN ASALLYERLD GLNWAGFYLV DGKQLVLGPF
QGKIACVRIP VGKGVCGTAV AENRVQRVGN VHAFPGHIAC DAASNAEIVL PITVKGKVIG
ILDIDSIVYD RFDEDDELGL ISVVAGLCEH LEFCDSAKYV TETAS
|
|---|
| |