Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1777 |
Symbol | |
ID | 6087182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1971879 |
End bp | 1972409 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641596845 |
Product | spore coat U domain-containing protein |
Protein accession | YP_001720521 |
Protein GI | 170024016 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0475012 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAAAATC ACACTCTTGT TGTATTCAGT TTAAGTCTCG TGTGCGGTTT ACTGCTATTC CAAGCATATC CAGTAAATGC AGTATCAAAA ACAGCCAATA TAACGGTAAC GGCCACGCTA CTGCCCACCT GCCTTGCGCG TTTTCTGGTC AGTGGCAGCA CAAGTTTTGG CACCTTGGAT TTTGGATCAA CTGTCGCGTT AACCCAACCA ATCTCGGTGG CAGGTCAAAC CAATAGTGGC GCTATCACCG TGCAATGCAG CAACGGTACC AGTTTTAACG TATTACTGAG CAGCGGACAG AGTGGCAATA CCAATAACCG TTATCTGTCC GGGGGGCCAT CAGCCCAGCA AGTGAGCTAC AACCTGTATA CCAACGCGAC CTATAGTGTC ATCTGGGATG ATGTGGTGGG GGTATCGCAG GTTGCTACCG GACAAGTCGT CACCATACCG GTTTATGGCC TGGTTCCTGC ACAATCGACG CCTGCGGTAG GGACCTATAC TGATACCGTT CAGGTCACGG TGAGTTGGTA A
|
Protein sequence | MKNHTLVVFS LSLVCGLLLF QAYPVNAVSK TANITVTATL LPTCLARFLV SGSTSFGTLD FGSTVALTQP ISVAGQTNSG AITVQCSNGT SFNVLLSSGQ SGNTNNRYLS GGPSAQQVSY NLYTNATYSV IWDDVVGVSQ VATGQVVTIP VYGLVPAQST PAVGTYTDTV QVTVSW
|
| |