Gene YPK_1771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1771 
Symbol 
ID6089359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1965827 
End bp1966216 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content48% 
IMG OID641596839 
Producthypothetical protein 
Protein accessionYP_001720515 
Protein GI170024010 
COG category[S] Function unknown 
COG ID[COG4405] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.622011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACAC TCCCACAGAA ATATGAAGAC GTTGAACGTT GGGCATTTGG TGATACTGAG 
CAGGTTGCGG ATGAGTTATT GGCATTGGTA CTGAATGGCA CCAAAACGGC GACCTGTGCA
GCATTGGATG ACGAGGGGGT TCCTCAGGCG GGTGACATAT TTGTCGTGGT TAATGGCCGG
AATCAGCCAG CATGTGCGGT AGAGTTAACC GAGGTGGAAC TGAAAACGTT TGATCAAGTT
GATGAGGCGC ATGCACTGGC GGAAGGTGAA GGCGATAGTA CACTGGCTTA CTGGCGTAAA
ACTCAACAAC GCTTTTTCGA GGAGTATGAT ATGTTCTCCC CAGATATGAT GCTGATCTGT
ATGAAGTTTA AAGTACTGGA AACCTTCTGA
 
Protein sequence
MATLPQKYED VERWAFGDTE QVADELLALV LNGTKTATCA ALDDEGVPQA GDIFVVVNGR 
NQPACAVELT EVELKTFDQV DEAHALAEGE GDSTLAYWRK TQQRFFEEYD MFSPDMMLIC
MKFKVLETF