Gene YPK_1756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1756 
Symbol 
ID6088540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1951300 
End bp1952187 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content50% 
IMG OID641596824 
Productchemotaxis methyltransferase CheR 
Protein accessionYP_001720500 
Protein GI170023995 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1352] Methylase of chemotaxis methyl-accepting proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.456402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAT CATCAATGAA GTCAGCGCCT CAATCATTAC CTCAAGAGTC CGGGTCGATA 
CTGACCCAAA TGATTCAACG GTTGCCGCTG TCGGATATTC ACTTCCGGCG TATCTGTCAA
CTTATCTATC AACGGGCTGG AATTGTTCTG GCTGAACATA AGCGGGAAAT GGTCTATAAC
CGCCTGGTCA GACGGTTGAG ATTACTGAAT ATCTCTGATT TTGGTCAGTA TCTGGCCTTG
TTGGAGAGTG ATCCGAACAG TGCTGAGTGG CAGGCATTTG TGAATGCGTT GACCACTAAC
CTGACGGCAT TTTTTCGTGA GGCTCATCAT TTTCCGCTCT TGGCAGAACA TGCTCGTCAG
CGGGCGGGCG GTTATTCAGT CTGGAGTACG GCGGCATCAA CCGGTGAAGA ACCTTACTCC
ATCGCTATGA CGCTGTGTGA TGTGTTAGGA AATCGCGCGG GAGCCTGCCA GATATTGGCC
AGCGATATCG ATACACAGGT ACTGGAGAAA GCTACCAGCG GTGTATATCG GCAAGATGAA
TTGCGCTCAT TGTCAACCCA GCAGATGCAA CGCTACTTTT TGCGAGGTAC GGGCCCGCAT
CAGGGCATGG TGCGAGTTCG TCCTGAACTG ACCAATTTAG TCCAGTTTCA GCAGTTGAAT
TTGCTGGCAC CTGAGTGGGC GCTACCGGGG CAATTTGATG CCATTTTTTG CCGTAATGTC
ATGATCTATT TTGATAAAGA GACGCAGGAA CGCATTCTGC GTCGTTTTGT ACCTTTGCTA
AAACCAGGCG GCCTGATGTT CGCTGGCCAC TCGGAGAATT TCAGCCAGAT CAGTCGGGAA
TTCTATTTGC GCGGGCAGAC CGTTTATGGG CTGACCAAGG AGAGGTGA
 
Protein sequence
MKRSSMKSAP QSLPQESGSI LTQMIQRLPL SDIHFRRICQ LIYQRAGIVL AEHKREMVYN 
RLVRRLRLLN ISDFGQYLAL LESDPNSAEW QAFVNALTTN LTAFFREAHH FPLLAEHARQ
RAGGYSVWST AASTGEEPYS IAMTLCDVLG NRAGACQILA SDIDTQVLEK ATSGVYRQDE
LRSLSTQQMQ RYFLRGTGPH QGMVRVRPEL TNLVQFQQLN LLAPEWALPG QFDAIFCRNV
MIYFDKETQE RILRRFVPLL KPGGLMFAGH SENFSQISRE FYLRGQTVYG LTKER