Gene YPK_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1748 
SymbolmotB 
ID6090464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1938957 
End bp1940312 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content49% 
IMG OID641596818 
Productflagellar motor protein MotB 
Protein accessionYP_001720494 
Protein GI170023989 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.540445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCATC AGAACCACCC CGTTATTCTG GTCAAAAAGC GCAAAACTAA GCATGGTGCT 
GCGCATTACG GTGGGTCATG GAAAATCGCT TACGCTGACT TTATGACAGC AATGATGGCC
TTTTTTCTGG TGATGTGGTT GCTGGCTGTT TCTAGCCCGC AAGAACTGAC GCAAATTGCC
GAATATTTTC GGACACCACT AAAAGTCGCC TTAACCAGCG GTGATAAAAG CAGTTCCAGT
ACTAGCCCTA TTCCCGGTGG TGGTGATGAT CCTACTCAAC AAGTGGGTGA AGTGAGAAAG
CAGATTAATT CCGAAGAAAG CAGGCAAGAG ATACACCGGC TCAATAAATT GCGGGAAAAA
CTGGATCAAT TGATTGAGTC TGACCCCCGG TTGAAGGCAT TACGTCCCCA TTTGCTGATT
AACATGATGG ATGAGGGCTT GAGGATCCAG ATTATTGATA GCCAAAATCG GCCAATGTTC
AAGATGGGGA GCGCGCAAGT AGAACCGTAT ATGCGTGATA TTTTACGTGC TATTGCGCCG
ATCCTGAATG ACATACCGAA TAAACTCAGT TTATCCGGTC ACACCGATGA CCTACCGTAT
GCCCGCGGTG AAAGAGGTTA CAGCAACTGG GAGTTATCGG CTGATCGCGC CAATGCCTCG
CGGCGTGAAT TACTGGCTGG TGGTTTGGAT GAAGGCAAAA TTCTGCGTGT AGTCGGTATG
GCGTCAACCA TGCGGTTGAA AGAGCAGGCA TCAGATGATC CGGTTAACCG CCGTATCAGT
ATTTTAGTGC TGAATAAGCA GTCTCAACAC GATATTGAGC ACGAGAATTT AGACAATAGA
GCGCTGGATA TAGAAAAAGC AACCGGCTTA AAGCAGATTG ATACTCACGG GACGGTGCCT
GTAGCGGCAG TAACACCATC ATCGGCAATA ACACAATCAT CGGCAATAAC ACAATCATCG
GCGGCAATAC CCTCACCGGC GGTAATACCA TCATCGGTGA CAACACAATC AGCTACGACA
ATACGATCAG CTACGACAAT ACGATCAGCT ACGACAATAC AAGCCACTGC GACAACACAA
GCAGTTACGA CAACACGATC AGCTACGACA ACACAAGCAT CGGCCGTAGC ACTGTCGTCA
GCAGGAGTAC TGCCATCAGA TGTCACATTG CCAGGCACGG TAGCACTGCC AGCGGCTGAA
CCGGTGAACA CGCAGCCGCA GCCGATGAGT ACAACTGAAA CACAACAATC GAGTACAGGG
AATATTACTT CAACTGCCAA TGGGCCAACG ACATCGTTAC CCGCAGCACC TGCAAGCAAT
ATACCGGTCT CTCCGACAAG CCGCGACGCA CAGTAG
 
Protein sequence
MKHQNHPVIL VKKRKTKHGA AHYGGSWKIA YADFMTAMMA FFLVMWLLAV SSPQELTQIA 
EYFRTPLKVA LTSGDKSSSS TSPIPGGGDD PTQQVGEVRK QINSEESRQE IHRLNKLREK
LDQLIESDPR LKALRPHLLI NMMDEGLRIQ IIDSQNRPMF KMGSAQVEPY MRDILRAIAP
ILNDIPNKLS LSGHTDDLPY ARGERGYSNW ELSADRANAS RRELLAGGLD EGKILRVVGM
ASTMRLKEQA SDDPVNRRIS ILVLNKQSQH DIEHENLDNR ALDIEKATGL KQIDTHGTVP
VAAVTPSSAI TQSSAITQSS AAIPSPAVIP SSVTTQSATT IRSATTIRSA TTIQATATTQ
AVTTTRSATT TQASAVALSS AGVLPSDVTL PGTVALPAAE PVNTQPQPMS TTETQQSSTG
NITSTANGPT TSLPAAPASN IPVSPTSRDA Q