Gene YPK_1745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1745 
Symbol 
ID6087208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1936933 
End bp1937283 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content38% 
IMG OID641596815 
Producttranscriptional activator FlhD 
Protein accessionYP_001720491 
Protein GI170023986 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0465343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACGT CTGAATTACT CAAACATATT TATGATATTA ATTTGTCATA TTTACTTTTA 
GCTCAACGGT TAATTAATGA TGAAAAAGCG TCGGCGATGT TTCGCTTAGG TATTACGGAT
ACCATGGCGG ATGCATTATC ACAGTTAACG TTACCGCAAA TGGTTAAATT AGCTGAAACT
AACCAATTAG TTTGTCACTT CCGTTTTAGT GACCACAACA CGATCCATCA TCTAACGAAA
GAGTCTCGCG TGGATGACCT GCAACAAATC CATACCGGAA TTCTCTTGTC GAGTCACTTA
CTCCACGAGC TATCGTTAAA AGACGATAGT ACGCCTAAAA AAAGAGCATG A
 
Protein sequence
MSTSELLKHI YDINLSYLLL AQRLINDEKA SAMFRLGITD TMADALSQLT LPQMVKLAET 
NQLVCHFRFS DHNTIHHLTK ESRVDDLQQI HTGILLSSHL LHELSLKDDS TPKKRA