Gene YPK_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1743 
Symbol 
ID6088058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp1931963 
End bp1932661 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content48% 
IMG OID641596813 
ProductMgtC/SapB transporter 
Protein accessionYP_001720489 
Protein GI170023984 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTAA CTCCTTTTGT TATGAATTTA TTACTGGCAA TGTGCCTCGG TGCATTAATT 
GGTGCCGAAA GACAATGGCG TCAGCGTATG GCAGGTCTAC GCACTAATGC GTTAGTCGCC 
ACGGGAGCTG CCGTATTTAT TCTCAGTTCT TATGCTACAT CACCAGATAG CCCTGGGCGT 
ATTGCCGCAC AGATTGTTTC GGGAATTGGT TTCCTTGGCG CGGGTGTCAT TATGCGTGAA 
GGCATGAATA TCCGCGGTCT GAATACGGCG GCCACGCTGT GGTGTTCGGC GGGCATTGGT 
GTGCTTTGTG GTCTGGGTTT GTACTGGAAT GCTGTCTTCG CAACTGCGGT TATTCTGTGT 
GCCAACATCT TATTACGTGA AGCAGCACAA CGTATTAATT TGCAGCCTCA ACAGCAGGCG 
ATAGATTTAG ATGTCCGTTA TCGTATTCTG ATCACTTGCG GAGCTGAAGA TGAAATACTG 
GTTCGCACAC TGATTTTGCA GGCATTAAAT GGGATGGCGT TGCACTTGCA GTCGTTATGC 
AGTGCTGATA TTGCCCGATC TGGTCAGTTA GAAGTCTGCG CAGAAATAGT GGCATCGCCA 
GCGGCACAAA AAGAAATTGA AAATATTGTC TGCCGCGTAA GTTTGGAACG TAGTGTCAGT 
GCCATACGTT GGCGCATTGC ATCTGAATTA CCGGCCTGA
 
Protein sequence
MSLTPFVMNL LLAMCLGALI GAERQWRQRM AGLRTNALVA TGAAVFILSS YATSPDSPGR 
IAAQIVSGIG FLGAGVIMRE GMNIRGLNTA ATLWCSAGIG VLCGLGLYWN AVFATAVILC 
ANILLREAAQ RINLQPQQQA IDLDVRYRIL ITCGAEDEIL VRTLILQALN GMALHLQSLC 
SADIARSGQL EVCAEIVASP AAQKEIENIV CRVSLERSVS AIRWRIASEL PA