| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1739 |
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| Symbol | lacZ |
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| ID | 6087222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 1924556 |
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| End bp | 1927756 |
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| Gene Length | 3201 bp |
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| Protein Length | 1066 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641596809 |
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| Product | beta-D-galactosidase |
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| Protein accession | YP_001720485 |
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| Protein GI | 170023980 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000361485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTCAC AGGAAAAGGT ACCATTCCAG GTGCAACTGA GTCTTCCCCA GATTTTGTCC
CGCCGAGATT GGGAAAACCC GCAGATCACA CAGTATCATC GCCTGGAGGC CCACCCGCCT
TTTCACAGTT GGCGTGATGT AGAATCTGCC CAGAAGGATC GTCCTTCACC ACAGCAACAA
ACACTCAATG GGCTATGGTC ATTCAGCTAT TTCACACAAC CTGAAGCGGT ACCCGAGCAC
TGGGTGAGGT GCGATTTAGC CGAGGCAAAG CCGCTCCCTG TACCGGCTAA CTGGCAACTT
CATGGTTATG ACGCACCAAT TTACACCAAT ATACAATACC CTATTCCCGT CAACCCACCA
CGGGTCCCGG ATCTAAATCC AACGGGTTGC TATTCCCGTG ATTTCACGTT AGAGCCAAGC
TGGTTGGCAT CGGGTAAGAC TCGCATTATT TTTGACGGTG TCAGTTCTGC ATTTTATCTG
TGGTGTAATG GGCAATGGGT AGGTTATTCA CAAGACAGCC GCCTACCTGC TGAGTTCGAT
CTCACCCCCT ATTTGCAGGC TGGCAGTAAC CGTATCGCAG TTTTAGTTCT GCGCTGGAGT
GATGGGAGTT ATCTTGAAGA TCAAGATATG TGGCGTATGA GCGGAATTTT TCGTGATGTG
AAATTGTTGC ATAAACCCGA GATTCACTTA CGGGATATCC ACATCATGAC GCATCTATCC
CCTGAATTCA CCTCTGCAAA TTTAGAGGTA ATGGCGGCCG TCAATATCCC CTCTCTACAG
CTCAATGATC CGCAGGTGAC CGGATCCTAT CAGCTCCGTG TACAACTTTG GTTAGCCGAT
AAATTGGTCG CCAGTTTACA ACAGCCTTTA GGCACCCAAG CCATTGATGA ACGAGGTCCT
TATACTGATC GTACCCAGCT AGTATTGCGA ATAGATCAGC CTCTGCTCTG GAGTGCCGAG
CAGCCGACGC TATACCGAGC CGTGGTTTCC TTGCTCAATC ATCAGCAAGA ATTGATTGAG
GCCGAAGCCT ATGACGTGGG TTTCAGGCAA GTGGCAATCC ATCAAGGCTT GCTTAAAATC
AATGGCAAAG CGGTGCTGAT CAGAGGGGTG AATCGACATG AACATCACCC GCAAACAGGT
CAGGCCATTG ATGAAGAGAG TCTGTTGCAA GACATTTTAT TAATGAAACA GCATAATTTT
AATGCTGTGC GCTGCTCCCA CTATCCCAAT CATCCTTTAT GGTACCGCCT TTGTGACCGC
TATGGTTTGT ATGTGGTTGA TGAAGCGAAT ATTGAGACAC ACGGTATGCA GCCCATGAGC
AGGCTGTCCG ATGACCCAAG CTGGTTTTCA GCTTTCAGTG AACGGGTGAC GCGGATGGTT
CAGCGAGATC GCAACCATCC ATGCATTATT ATCTGGTCAC TGGGCAATGA ATCAGGCCAT
GGCGCAACCC ATGATGCCCT CTATCGTTGG ATAAAAACCA ATGACCCCAC CCGCCCTGTG
CAATATGAAG GGGGCGGTGC CAACACCTTA GCGACCGACA TTCTGTGTCC GATGTATGCC
CGTGTTGATG AAGACCAGCC CTTTCCTGCC GTCCCCAAGT GGTCAATCAA AAAATGGATT
GGCTTACCGA ATGAATCTCG CCCCTTGATC CTATGTGAAT ACGCCCATGC GATGGGCAAT
AGCTTCGGTG GATTTGCCCG CTATTGGCAG GCATTTCGTC AGTACCCGCG CTTACAGGGC
GGGTTTATTT GGGACTGGGT AGACCAAAGT CTGACTCATC ATAATGACCA TGGTCAGCCT
TATTGGGCGT ATGGGGGTGA TTTTGGTGAT ACTCCCAATG ACCGCCAGTT CTGCATGAAC
GGATTAGTCT TCCCTGACCG CAGCCCGCAC CCGAGCCTTT ATGAAGCGCA GTGCGCACAG
CAATTCTTCC AATTTTCGTT GCTGAGTACG ACCCCGTTGG TGATCAACAT TACCAGTGAA
TATTTGTTCC GAGAGAGTGA TAACGAACAA TTATATTGGC GGATAATGTT AGAGGGAGAA
TCCGTGTTGG AGGGTAGCCA ACCCCTGAAT TTGTCGCCTG AAAGCTCACA GTGCTACAGG
TTGGCAGAGA AATTACCCAC GCTTAATAAA CCTGGGCAGC TATGGCTGAA TGTTGAGATA
AGGCAACCAA AAGAAACCCC GTGGTCCCCT GCTCAACATC GCAGTGCCTG GCATCAATGG
CGCTTACCAC AACCACTCTT TTCGCCGTCC AGTGATCTGA CCAATGCTAC AGCGCATTAT
GCCCCTCAAC TGCAACATAA CCTTCAACTA CAACATAACC GTCAACTACA ACATGACCTT
CAACTGCAGC AAGATGAACA GCATATTAAG GTGACTTATC AGCAACAATG CTGGCAATTC
AGTCGTCAAA CGGGGCGGTT GGATCAATGG TGGGTGGCGG ATAAACCGAT GCTACTGCGC
CCACTACAAG ATCAATTTGT GCGTGCGCCG CTGGATAACG ATATCGGTAT CAGCGAAGCT
ACGCATATTG ACCCCAATGC TTGGGTTGAG CGCTGGAAGA AAGCCGGAAT GTATCAACTC
CAGCAACGCT GCCTCTCTCT ACACGTAGAT CATTTATCCC ATTCAGTACA AATCAGTGCC
GAATACGGTT ATGAATTCGA GCAAGAGCCC TTGCTACACA GCCATTGGGT ATACCGTTTT
GACCGACATG GCCGTATGAC CATTGATGTT AACGTCCGTA TCGCTACCTC ACTCCCTGCG
CCAGCCAGAA TTGGCATGTG TTGCCAACTG GCTGATATCT CACCTACGGT TGAATGGCTA
GGGTTGGGGC CACATGAAAA CTACCCTGAT CGGCAGCTTG CAGCACAATA TGGGCACTGG
TCCCTGCCAT TAGAGCAGAT GCACACCGCG TATATTTTCC CCAGTGAGAA TGGCTTGCGC
TGCAATACCC ATACGCTGAA TTATGGCCGC TGGACGTTAA CGGGCGATTT CCACTTTGGT
ATAAGTCGCT ACAGCACCCA GCAACTGATG GTGACCTCCC ATCAACATCT ATTGGAACCC
GAAGAGGGCA CCTGGCTCAA TATTGATGGT TTCCATATGG GGGTGGGCGG TGATGATTCA
TGGAGCCCGA GTGTTCACAT TGATGACATA CTCACCCGTG AAACCTATCA GTACCAAATC
TGTTGGCAAT ACAAGGTGTA A
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| Protein sequence | MTSQEKVPFQ VQLSLPQILS RRDWENPQIT QYHRLEAHPP FHSWRDVESA QKDRPSPQQQ
TLNGLWSFSY FTQPEAVPEH WVRCDLAEAK PLPVPANWQL HGYDAPIYTN IQYPIPVNPP
RVPDLNPTGC YSRDFTLEPS WLASGKTRII FDGVSSAFYL WCNGQWVGYS QDSRLPAEFD
LTPYLQAGSN RIAVLVLRWS DGSYLEDQDM WRMSGIFRDV KLLHKPEIHL RDIHIMTHLS
PEFTSANLEV MAAVNIPSLQ LNDPQVTGSY QLRVQLWLAD KLVASLQQPL GTQAIDERGP
YTDRTQLVLR IDQPLLWSAE QPTLYRAVVS LLNHQQELIE AEAYDVGFRQ VAIHQGLLKI
NGKAVLIRGV NRHEHHPQTG QAIDEESLLQ DILLMKQHNF NAVRCSHYPN HPLWYRLCDR
YGLYVVDEAN IETHGMQPMS RLSDDPSWFS AFSERVTRMV QRDRNHPCII IWSLGNESGH
GATHDALYRW IKTNDPTRPV QYEGGGANTL ATDILCPMYA RVDEDQPFPA VPKWSIKKWI
GLPNESRPLI LCEYAHAMGN SFGGFARYWQ AFRQYPRLQG GFIWDWVDQS LTHHNDHGQP
YWAYGGDFGD TPNDRQFCMN GLVFPDRSPH PSLYEAQCAQ QFFQFSLLST TPLVINITSE
YLFRESDNEQ LYWRIMLEGE SVLEGSQPLN LSPESSQCYR LAEKLPTLNK PGQLWLNVEI
RQPKETPWSP AQHRSAWHQW RLPQPLFSPS SDLTNATAHY APQLQHNLQL QHNRQLQHDL
QLQQDEQHIK VTYQQQCWQF SRQTGRLDQW WVADKPMLLR PLQDQFVRAP LDNDIGISEA
THIDPNAWVE RWKKAGMYQL QQRCLSLHVD HLSHSVQISA EYGYEFEQEP LLHSHWVYRF
DRHGRMTIDV NVRIATSLPA PARIGMCCQL ADISPTVEWL GLGPHENYPD RQLAAQYGHW
SLPLEQMHTA YIFPSENGLR CNTHTLNYGR WTLTGDFHFG ISRYSTQQLM VTSHQHLLEP
EEGTWLNIDG FHMGVGGDDS WSPSVHIDDI LTRETYQYQI CWQYKV
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