Gene YPK_1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1728 
Symbol 
ID6091179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1917300 
End bp1917707 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content48% 
IMG OID641596798 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001720474 
Protein GI170023969 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAGTGA CAAAACTACA AAATATGAAT GGCAACATTT CATTTCCGGA ACAACTCAGG 
CGCGGTGAAC TGCTTAATGT CGATTGCCCG TCAAGAGAGA TACTCAAGCG AGTGACCAGC
CGCTGGGGGG TGTTGGTCTT GATCGCTTTG AGTAATGAAA CACTGCGTTT TAGTGCATTG
AGACGAAAGA TTGGTGGGGT CAGTGAGAAA ATGTTGGCAC AAACGCTCCA GCATCTTGAA
GAAGATGGTT TTATTGACAG GACTGCTTAT CCGGTAGTGC CACCTCACGT GGAATACAGC
CTCACTCCGT TAGGAAAAGA GATCCAAGAG CAGGTGGAAG GGCTGACGGT GTGGTTGGAG
ACAAACTTGC ATCGGATTAT GGAACAACGG CAGCAGCGGT CAGTATGA
 
Protein sequence
MRVTKLQNMN GNISFPEQLR RGELLNVDCP SREILKRVTS RWGVLVLIAL SNETLRFSAL 
RRKIGGVSEK MLAQTLQHLE EDGFIDRTAY PVVPPHVEYS LTPLGKEIQE QVEGLTVWLE
TNLHRIMEQR QQRSV