Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1727 |
Symbol | |
ID | 6091014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1916307 |
End bp | 1917164 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641596797 |
Product | NmrA family protein |
Protein accession | YP_001720473 |
Protein GI | 170023968 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGCAG TCACCGGTGC CACCGGCCAA TTAGGCCGCC TCGTTATTAA CGTATTATTA AAAAAAGTGC CCGCCCACGA CATCATTGCG GCAGTCCGTA GCCCTGATAA AGCCAAGGAT CTTATGGCGT TAGGGGTGCA AGTGCGTCAA GCCGATTATA ATCAACCAAC AACGCTGGAT AATGCGTTTA AAGGGGTTGA TAAACTGCTG TTAATTTCAT CCAGTGAAGT AGGACAACGT GTTGCGCAGC ATACGGCGGT GATCAATGCG GCCAAGCGCG CGGGTGTCAA ACTTTTGGCG TATACCAGCC TGTTACATGC GGATAAATCC CCTCTGGGAT TAGGTGAAGA ACATCGGGCA ACCGAGGGAT TGCTACGTGA TTCAGGTCTG CCCGTCGTAT TACTGCGTAA TGGCTGGTAT ACCGAAAATT ATGCGGCAAG CATCGCTCCA GCCTTGGCCC ACGGTGCATT TATCGGTGCC GCAGGCAATG GACGTATCGC TTCAGCCAGT CGTGAAGATT ATGCTGAAGC TGCCGCCACA ATACTGGTTC AGGAAAATCA AGCCGGTAAG ATTTACGAAT TGGCTGGCGA TGATGCCTAT ACATTATCCG AATTCTCGGC AGAAATTACT CGCCAATCCG GTAAAGCAGT CGCCTACCAA GATTTATCCG AGGCAGACTT TAAACACGCC CTAATCAGTG CCGGTTTACC TGACGGCTTG GCCGGTATGC TGGCGGATTC AGATGCCGGT GCCGCGCAAG GTGGGTTATT TGATGACTCC CATACATTGA GTAAACTTAT TGGCCGCCCA ACCACCCCTT ATGCCAAGGT AATAACAGCA ACACTGGCGA CACGTTAA
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Protein sequence | MIAVTGATGQ LGRLVINVLL KKVPAHDIIA AVRSPDKAKD LMALGVQVRQ ADYNQPTTLD NAFKGVDKLL LISSSEVGQR VAQHTAVINA AKRAGVKLLA YTSLLHADKS PLGLGEEHRA TEGLLRDSGL PVVLLRNGWY TENYAASIAP ALAHGAFIGA AGNGRIASAS REDYAEAAAT ILVQENQAGK IYELAGDDAY TLSEFSAEIT RQSGKAVAYQ DLSEADFKHA LISAGLPDGL AGMLADSDAG AAQGGLFDDS HTLSKLIGRP TTPYAKVITA TLATR
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