Gene YPK_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1727 
Symbol 
ID6091014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1916307 
End bp1917164 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content51% 
IMG OID641596797 
ProductNmrA family protein 
Protein accessionYP_001720473 
Protein GI170023968 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGCAG TCACCGGTGC CACCGGCCAA TTAGGCCGCC TCGTTATTAA CGTATTATTA 
AAAAAAGTGC CCGCCCACGA CATCATTGCG GCAGTCCGTA GCCCTGATAA AGCCAAGGAT
CTTATGGCGT TAGGGGTGCA AGTGCGTCAA GCCGATTATA ATCAACCAAC AACGCTGGAT
AATGCGTTTA AAGGGGTTGA TAAACTGCTG TTAATTTCAT CCAGTGAAGT AGGACAACGT
GTTGCGCAGC ATACGGCGGT GATCAATGCG GCCAAGCGCG CGGGTGTCAA ACTTTTGGCG
TATACCAGCC TGTTACATGC GGATAAATCC CCTCTGGGAT TAGGTGAAGA ACATCGGGCA
ACCGAGGGAT TGCTACGTGA TTCAGGTCTG CCCGTCGTAT TACTGCGTAA TGGCTGGTAT
ACCGAAAATT ATGCGGCAAG CATCGCTCCA GCCTTGGCCC ACGGTGCATT TATCGGTGCC
GCAGGCAATG GACGTATCGC TTCAGCCAGT CGTGAAGATT ATGCTGAAGC TGCCGCCACA
ATACTGGTTC AGGAAAATCA AGCCGGTAAG ATTTACGAAT TGGCTGGCGA TGATGCCTAT
ACATTATCCG AATTCTCGGC AGAAATTACT CGCCAATCCG GTAAAGCAGT CGCCTACCAA
GATTTATCCG AGGCAGACTT TAAACACGCC CTAATCAGTG CCGGTTTACC TGACGGCTTG
GCCGGTATGC TGGCGGATTC AGATGCCGGT GCCGCGCAAG GTGGGTTATT TGATGACTCC
CATACATTGA GTAAACTTAT TGGCCGCCCA ACCACCCCTT ATGCCAAGGT AATAACAGCA
ACACTGGCGA CACGTTAA
 
Protein sequence
MIAVTGATGQ LGRLVINVLL KKVPAHDIIA AVRSPDKAKD LMALGVQVRQ ADYNQPTTLD 
NAFKGVDKLL LISSSEVGQR VAQHTAVINA AKRAGVKLLA YTSLLHADKS PLGLGEEHRA
TEGLLRDSGL PVVLLRNGWY TENYAASIAP ALAHGAFIGA AGNGRIASAS REDYAEAAAT
ILVQENQAGK IYELAGDDAY TLSEFSAEIT RQSGKAVAYQ DLSEADFKHA LISAGLPDGL
AGMLADSDAG AAQGGLFDDS HTLSKLIGRP TTPYAKVITA TLATR