| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1720 |
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| Symbol | mnmA |
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| ID | 6088440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 1908228 |
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| End bp | 1909343 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641596790 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001720466 |
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| Protein GI | 170023961 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATA ATAGCCAGAA AAAAGTCATC GTCGGCATGT CCGGCGGTGT CGACTCTTCC
GTTTCCGCTT ACCTGCTCCA GCAACAGGGC TATCAAGTTG CTGGCCTGTT CATGAAGAAT
TGGGAAGAGG ATGATGACGA AGAATATTGC TCTGCAGCGA CCGATCTGGC CGATGCGCAA
GCAGTATGTG ACAAACTGGG TATGGAGTTG CACACCGTTA ATTTTGCAGC AGAATACTGG
GATAACGTTT TCGAATTGTT CCTGGCAGAA TATAAAGCCG GGCGGACACC TAATCCTGAT
ATTCTGTGTA ATAAAGAGAT AAAATTTAAA GCGTTTCTTG AATTTGCAGC TGAAGATTTG
GGCGCAGATT ATATCGCCAC AGGTCACTAC GTCCGTCGCC AGGATGTTGA TGGTAAAAGC
CGCCTACTGC GCGGCCTTGA TGGAAATAAA GACCAAAGCT ACTTCCTGTA TACATTAAGT
CACGAACAGA TTGCTCAAAG TTTGTTCCCT GTCGGTGAGT TAGAAAAACC TGAAGTGCGT
CGCATAGCAG AACAGCTCGA TTTAGTCACC GCAAAGAAAA AAGACTCTAC GGGCATCTGC
TTTATCGGGG AGCGCAAATT CCGTGATTTC CTTGGCCGCT ACCTGCCTGC ACAGCCAGGT
CCGATCATGA CGGTTGACGG CCAACTGGTG GGCAAACACC AAGGGTTGAT GTATCACACC
CTCGGGCAAC GCAAAGGTTT AGGTATCGGG GGTACCAAAG AGGGGGGGGA TGACCCGTGG
TACGTCGTGG ATAAAGACCT GGACAGCAAC ACGTTACTGG TTGCTCAGGG GCACGAACAC
CCTCGGTTAA TGTCTGTTGG CCTGGTTGCT CAACAGCTAC ATTGGGTCGA TCGCCAACCC
GTGACCGCCC CTTTCCGCTG TGTCGTAAAA ACACGTTATC GTCAGCAAGA TATTCCCTGT
ACCGTAACAC CACTTGATGA CGAACGGGTT GACGTTCGGT TTGATGACCC GGTTGCTGCC
GTCACGCCTG GCCAGTCTGC CGTCTTTTAC CAAGGTGAAA TCTGCCTGGG GGGCGGTATT
ATTGAACAGC GTTACCCACT GACTAATCCG GCATAA
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| Protein sequence | MSDNSQKKVI VGMSGGVDSS VSAYLLQQQG YQVAGLFMKN WEEDDDEEYC SAATDLADAQ
AVCDKLGMEL HTVNFAAEYW DNVFELFLAE YKAGRTPNPD ILCNKEIKFK AFLEFAAEDL
GADYIATGHY VRRQDVDGKS RLLRGLDGNK DQSYFLYTLS HEQIAQSLFP VGELEKPEVR
RIAEQLDLVT AKKKDSTGIC FIGERKFRDF LGRYLPAQPG PIMTVDGQLV GKHQGLMYHT
LGQRKGLGIG GTKEGGDDPW YVVDKDLDSN TLLVAQGHEH PRLMSVGLVA QQLHWVDRQP
VTAPFRCVVK TRYRQQDIPC TVTPLDDERV DVRFDDPVAA VTPGQSAVFY QGEICLGGGI
IEQRYPLTNP A
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