| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1709 |
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| Symbol | |
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| ID | 6091287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1896871 |
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| End bp | 1898118 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641596779 |
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| Product | outer membrane-specific lipoprotein transporter subunit LolE |
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| Protein accession | YP_001720455 |
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| Protein GI | 170023950 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family
[TIGR02213] lipoprotein releasing system, transmembrane protein LolE |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.105135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGGTTT CGCCACTTTC ACTTCTTATC GGTTTACGGT TTAGCCGTGG TCGCCGTCGT
GGCGGTATGG TGTCGTTAAT CTCCGTGATT TCTACGTTAG GTATCGCCTT GGGTGTGGCA
GTGCTTATCG TGGGGTTAAG TGCGATGAAC GGCTTCGAAC GTGAGTTGAA AAATCGTATT
TTAGCCGTGG TGCCTCACGG CGAAATTGCC GTGGTTAATC AGCCGTTCAG CGGTTGGCCA
CAAACCTTAC AGCGTATCGA AAAGGTGCCC GGTATCGTGG CTGCTGCGCC TTATATTAAT
TTTACCGGTT TGATTGAAAA CAGTACGCAA CTGCGGGCAG TGCAGGTCAA AGGTGTGGAT
CCCGAGGCCG AACAGCATCT CAGTGCGTTG CCTAGCTTCG TTCTTGACAA TGCCTGGAGC
CATTTTAAGG CCGGGCAACA ACAGATTATT TTAGGTAAAG GGTTGGCTGA TACCTTGGGG
GTGAAGCAAG GCGATTGGTT GACGGTGATG ATCCCTAACA GCGATCCTGA GATGAAATTG
CTGCAACCTA AGCGCATCCG TTTACAGGTT GCCGGTATTT TTCAACTGAG TGGTCAGTTG
GATCACAGTT TGGCATTAGT GCCTCTAATC GATGCACAAC AATATCTTGA TATGGGTGAT
AGTGTCACGG GTATCGCCAT CAAAGTGAAT GATGTTTACA ACGCCAATCA ACTGGTACGT
AACGCGGGTG AAGTGAGTAA CGCATACGTT TATATCAATA GCTGGATTGG GACCTATGGC
TATATGTACC GTGATATCCA AATGATCCGC ACTATCATGT ATTTAGCGAT GGTACTCGTG
ATCGGCGTCG CCAGTTTTAA TATTGTGTCA ACGTTGGTCA TGGCGGTTAA AGATAAAAGT
AGCGATATCG CAGTATTACG TACATTAGGT GCCAAAGATG GTCTGATTCG CGCCATCTTC
ATTTGGTATG GCCTGTTGGC TGGCCTTATT GGCAGTATCA GCGGGGCCGT GATAGGGGTT
ATCGTCTCCC TACAGTTGAC CACCATAATC CGCGGGCTAG AAAAGATGGT CGGGCATCAA
TTTTTGTCGA GCGATATCTA TTTCATTGAT TTTCTACCGT CAGAGTTGCG TTGGTTTGAT
GTGGCTTGTG TGTTGGCAAC GGCACTGGTG CTCAGCTTGA TTGCCAGTTG GTATCCGGCA
CGTCGCGCCA GTCGTATTGA TCCGGCACGG GTCCTCAGCG GGCAGTAA
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| Protein sequence | MGVSPLSLLI GLRFSRGRRR GGMVSLISVI STLGIALGVA VLIVGLSAMN GFERELKNRI
LAVVPHGEIA VVNQPFSGWP QTLQRIEKVP GIVAAAPYIN FTGLIENSTQ LRAVQVKGVD
PEAEQHLSAL PSFVLDNAWS HFKAGQQQII LGKGLADTLG VKQGDWLTVM IPNSDPEMKL
LQPKRIRLQV AGIFQLSGQL DHSLALVPLI DAQQYLDMGD SVTGIAIKVN DVYNANQLVR
NAGEVSNAYV YINSWIGTYG YMYRDIQMIR TIMYLAMVLV IGVASFNIVS TLVMAVKDKS
SDIAVLRTLG AKDGLIRAIF IWYGLLAGLI GSISGAVIGV IVSLQLTTII RGLEKMVGHQ
FLSSDIYFID FLPSELRWFD VACVLATALV LSLIASWYPA RRASRIDPAR VLSGQ
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