Gene YPK_1705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1705 
Symbol 
ID6087319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1890477 
End bp1891016 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content50% 
IMG OID641596775 
Producthypothetical protein 
Protein accessionYP_001720451 
Protein GI170023946 
COG category[S] Function unknown 
COG ID[COG3134] Predicted outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACAAAT CAATGTTAGC CGGTGTGGGG ATTGGTATTG CCGCCGCTCT GGGAATTGCT 
GCAGTGGCGA ATATAGATGT CTTCTCCAGT GCACCACAAT ATGCCAAAGT GCTTACTGCA
ACCCCGATAA AAGAGACCAT CAAAACGCCT CGTCAAGAGT GCCGTAACGT GACAGTGACG
CACCGCAAAC CAGTACAAGA CGAAAATAAG ATCGCAGGCT CAGTTTTGGG GGCAGTCGCA
GGTGGGGTGT TGGGGCATCA GGTCGGTGGT GGCCGTGGTA AGGATATCGC TACCGTAGCG
GGTGCGTTAG CGGGAGGATA TGCAGGTAAT CGTGTGCAAA ATAATATGCA GGAAAATGAT
ACCTATACCA CAACCCAACA GCGTTGCCAG ACCGTGTATG ACAAATCACA GAAGACGCTG
GGATATGACG TAACCTACAA AATTGGCGAT CAGCAGGGAA AAATTCGTAT GGATCGTGAT
CCAGGTATGC AGATCCCCAT TGATAAAAAT GGTCAACTGG TGCTGAACAA CCGAGCGTAA
 
Protein sequence
MNKSMLAGVG IGIAAALGIA AVANIDVFSS APQYAKVLTA TPIKETIKTP RQECRNVTVT 
HRKPVQDENK IAGSVLGAVA GGVLGHQVGG GRGKDIATVA GALAGGYAGN RVQNNMQEND
TYTTTQQRCQ TVYDKSQKTL GYDVTYKIGD QQGKIRMDRD PGMQIPIDKN GQLVLNNRA