| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1700 |
|---|
| Symbol | |
|---|
| ID | 6091260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 1885132 |
|---|
| End bp | 1886163 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641596770 |
|---|
| Product | beta-hexosaminidase |
|---|
| Protein accession | YP_001720446 |
|---|
| Protein GI | 170023941 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGTCCCG TGATGTTAGA TGTTGCCAGC TATGAGCTGG ATGCTGAAGA GCGTGAGATT
TTAAAACACC CACTGGTGGG AGGGTTGATC TTATTCAGCC GTAATTTTCA TGATGCGGAG
CAGTTACGCG AATTAGTACG CCAAATCCGT GCAGCATCGC ATGAACGTTT GGTGGTCGCA
GTGGATCAGG AAGGGGGGCG GGTCCAACGC TTTCGTGACG GTTTTACCCG CCTGCCAGCG
GCTCAGTCTT TCGCGGCTAT CAATGATGCC GCTACTGCGG CTCAACTGGC GCAAGAGGCG
GGGTGGTTGA TGGCAGCAGA AATGATGGCG ATGGATATCG ATATCAGTTT TGCTCCAGTA
CTGGATATTG GCCATGTCAG CGCCGCAATT GGTGAGCGTT CATTCCACAG TGATCCACAA
CAGGCGCGGA TAATGGCGGA GTGTTTCATC CGTGGGATGC ACAGTGCAGG GATGAAAACC
ACGGGCAAGC ATTTTCCAGG GCACGGCGCA GTAACCGCAG ATTCACATAA AGAGACGCCA
CATGATAATC GGCCACTGGC AGAAATCCGT ACTCATGATA TGGTTATATT TCGTGAATTG
ATCCAGCGGA AATTACTGGA TGCGATTATG CCTGCTCACG TGATTTATAC CGAAGCCGAT
GCACGGCCTG CCAGCGGTTC TGCCTATTGG TTACAAGAGA TATTGCGCCA AGAGCTAGGG
TTCGAGGGCA TCATTTTCTC TGATGATCTC TCGATGGAAG GGGCTGCGAT CATGGGCAGT
TACGCCGAGC GCGGCCAGGC ATCGTTGGAT GCCGGTTGCG ATATGATTTT GGTGTGTAAT
AACCGTCAGG GGGCCGTGAG TGTGCTGGAT AATCTGTCTC CGATCAAAGC CGACCAACTG
ACCCGTTTGT ACCATTCAGG GCAATTTGAC CGCCAGACAT TGATGGCTTC ATCCCGTTGG
CAACAGGCGA ATAAAGCATT AACGGCACTC AGCGAACGTT GGGATGCACA TAAACAAACG
TTGGGGCAAT AG
|
|---|
| Protein sequence | MGPVMLDVAS YELDAEEREI LKHPLVGGLI LFSRNFHDAE QLRELVRQIR AASHERLVVA
VDQEGGRVQR FRDGFTRLPA AQSFAAINDA ATAAQLAQEA GWLMAAEMMA MDIDISFAPV
LDIGHVSAAI GERSFHSDPQ QARIMAECFI RGMHSAGMKT TGKHFPGHGA VTADSHKETP
HDNRPLAEIR THDMVIFREL IQRKLLDAIM PAHVIYTEAD ARPASGSAYW LQEILRQELG
FEGIIFSDDL SMEGAAIMGS YAERGQASLD AGCDMILVCN NRQGAVSVLD NLSPIKADQL
TRLYHSGQFD RQTLMASSRW QQANKALTAL SERWDAHKQT LGQ
|
|---|
| |