| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1699 |
|---|
| Symbol | |
|---|
| ID | 6087359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 1884195 |
|---|
| End bp | 1885061 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641596769 |
|---|
| Product | thiamine kinase |
|---|
| Protein accession | YP_001720445 |
|---|
| Protein GI | 170023940 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
|---|
| TIGRFAM ID | [TIGR02721] thiamine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGT CCAATATTGA TTCTTCTCTG TCTGCCTTAA TAGCAAACAT CAATCCGGCG
GTGAAAACCG CCGATTGTCA TATTAGCCCG GTATCAGGAT TAACCGGTGA AAGTTGGCGT
ATTACTGGCC CAGGGATTGA CTGGCTGGCG CGTGAGCAAT CGCCGCACAA AAGTCAGTTG
GGGGTCAACC GACGACGTGA GCGTAAATTC CTGCAACATA TTGCTGGCAA TGGGCTGTCT
CCAGCGGTGA TTGCTGCTAA TCAGCGTTGG CTAGTGGTGA ACTGGCTTGA AGGTGACGTT
GTCACTAATG AGCAGTTCAT CCCATTGGTG AATCATGGGC AATTAGCGCG GTTACTGGCC
CGCTTGCATC ATTTGCCCGC GAGTGGTTAC CGTCTGGATT TGCGTGCTCA GATTGCCCGC
TATGGGGCGC TTATTGATCC TACGCGCCGT TCACCTGGCG GAGTGCGGCT ACAGCATGAT
TTTCTTCGTA GGCCATTACC AGCGATAACA AAAATTGCTC CTTTGCATAT GGATATTCAC
CCCGGCAATT TGTTAACAAC CCCCGTTGGG CTGAAATTAA TTGACTGGGA ATATGCGGCA
GATGGCGATA TTGCTTTGGA AATTGCCGCG CTATTTCGCG GTAATCATTG GTCAATGCTA
CAACAACAGG CTTTTTTGCA GGACTATTGC AACAATGAGC ACGGTTATCA TGACATCGCT
CGTTTATCCC GTCAGATTCA GCAATGGTTG CCCTGGGTCG ATTACCTGAT GTTGATGTGG
TTTGAAGTGC GTTGGCAGCA AACCGCGGAC CCAATATTCT TGGCATGGGC CGCGCCGTTG
CGCCAACGTT TTAATTTGTC TTTTTAA
|
|---|
| Protein sequence | MRLSNIDSSL SALIANINPA VKTADCHISP VSGLTGESWR ITGPGIDWLA REQSPHKSQL
GVNRRRERKF LQHIAGNGLS PAVIAANQRW LVVNWLEGDV VTNEQFIPLV NHGQLARLLA
RLHHLPASGY RLDLRAQIAR YGALIDPTRR SPGGVRLQHD FLRRPLPAIT KIAPLHMDIH
PGNLLTTPVG LKLIDWEYAA DGDIALEIAA LFRGNHWSML QQQAFLQDYC NNEHGYHDIA
RLSRQIQQWL PWVDYLMLMW FEVRWQQTAD PIFLAWAAPL RQRFNLSF
|
|---|
| |