Gene YPK_1692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1692 
Symbol 
ID6088289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1877864 
End bp1878886 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content52% 
IMG OID641596762 
ProductDNA polymerase III subunit delta' 
Protein accessionYP_001720438 
Protein GI170023933 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0197649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTGGT ATCCGTGGCT TAACGCCCCT TACCGCCAAC TGGTTGGGCA ACACAGTACC 
GGGCGCGGGC ACCATGCATT ACTGCTGCAT TCATTACCCG GTAATGGCGA AGACGCATTG
ATTTATGCGC TGAGTCGTTG GCTAATGTGT CAGCAGCGGC AAGGTGAGAA GAGTTGTGGT
GAATGCCATA GCTGCCGCTT GATGTTGGCA GGCAACCACC CCGATTGGTA TGTACTGACA
CCGGAAAAAG GCAAAAGCAG TATCGGGGTT GAGTTGGTTC GTCAATTGAT TGATAAACTG
TATTCCCATG CTCAACAAGG CGGTGCAAAG GTGGTGTGGT TGCCACATGC CGAAGTGTTG
ACCGATGCCG CTGCTAATGC CCTGCTAAAA ACGCTGGAAG AGCCTCCAGA GAAGACCTAT
TTTCTGTTGG ATTGCCACCA ACCCGCCAGC TTGCTGGCTA CACTGCGTAG CCGCTGTTTT
TATTGGTATC TGGCTTGCCC GGATACGGCT ATTTGTCTGC AATGGCTCAA TCTGCAATGG
CGTAAGCGGC AGATCCCTGT GGAGCCCGTT GCGATGTTGG CGGCCCTGAA ATTGAGTGAA
GGCGCACCGC TGGCGGCTGA GCGGTTGCTT CAACCAGAGC GCTGGAGTAT CCGCAGCGCT
TTGTGTAGCG GGCTACGCGA GGCACTGAAC CGCTCAGACT TGCTGTCGTT GTTACCACAA
CTTAACCATG ATGATGCTGC TGAACGTCTG CAATGGCTCT CTTCACTGCT CTTGGATGCG
TTGAAGTGGC AGCAAGGGGC AGGGGAGTTT GCGGTTAATC AGGATCAATT ACCCTTAGTG
CAACAGTTGG CACACATCGC GGCGACGCCA GTATTACTTC AGTTGGCTAA GCAACTGGCT
CATTGCCGCC ATCAATTATT ATCTGTGGTA GGTGTTAATC GTGAATTGTT ACTCACTGAG
CAACTGCTTA GCTGGGAAAC AGCACTGTCC ACGGGTACTT ATTCCACCTT ACCTTCGTTG
TAA
 
Protein sequence
MNWYPWLNAP YRQLVGQHST GRGHHALLLH SLPGNGEDAL IYALSRWLMC QQRQGEKSCG 
ECHSCRLMLA GNHPDWYVLT PEKGKSSIGV ELVRQLIDKL YSHAQQGGAK VVWLPHAEVL
TDAAANALLK TLEEPPEKTY FLLDCHQPAS LLATLRSRCF YWYLACPDTA ICLQWLNLQW
RKRQIPVEPV AMLAALKLSE GAPLAAERLL QPERWSIRSA LCSGLREALN RSDLLSLLPQ
LNHDDAAERL QWLSSLLLDA LKWQQGAGEF AVNQDQLPLV QQLAHIAATP VLLQLAKQLA
HCRHQLLSVV GVNRELLLTE QLLSWETALS TGTYSTLPSL