| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1662 |
|---|
| Symbol | |
|---|
| ID | 6087069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 1845863 |
|---|
| End bp | 1848472 |
|---|
| Gene Length | 2610 bp |
|---|
| Protein Length | 869 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641596732 |
|---|
| Product | glucosyltransferase MdoH |
|---|
| Protein accession | YP_001720408 |
|---|
| Protein GI | 170023903 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2943] Membrane glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAGC TAACTCAAAC GCCTATTCAG GATTACATTG CGGACTTGCC TCTGACTGCG
CAGCAACAAG AGGCGTTACG CGCTGCTTTT CCTGACAATA TGTTACTCGA TAGTTCACCG
GATGCCATGC GTCGTTTGCA TCAACGATTA GCATGCACAG GACACCAAGC ACACAGCGGT
GTGGCAGGCG ACCCCGCTGA AGAAGACAGC GCGTTGGTAT CGGTCAAGGC TCGTTTACAG
GCAGCATGGC CGGAAGTACT GAAGGGTGAG AATGTGCTGG GGCAGGACAG TGAAGGGCGT
ACCGTGATCC ATGCCGTGCC GCCAATCAAG CGTACCAGCA TGGCACCGCA GGCTTGGCGT
ACGAATCCGG TTGGGCGTTT TTGGGATAGG TTACGCGGTC AAACCCCGGT TTTACCGGCA
GAAACCCATG AACAGGCCGT CGCCGAGAAA AAATGGCGCA GCGTCGGCTC CTTGCGCCGC
TACATCTTGC TGATATTGAT CGTGCTGCAA ACCACGATCG CGACCCGCTA TATGAAGACG
ATTTTGCCTT ATCAGGGTTG GGCATTGATT GATCCCTTCG ATATCTGGCA ACAGAACTGG
CAGATTTCAG TGATGCAATT ACTGCCTTAT CTGCTGCAAA CCGGGGTCTT GATCCTGTTT
GCAGTCCTGT TCTGCTGGGT TTCTGCCGGT TTTTGGACCG CGCTGATGGG GTTCCTGCAA
TTACTGACGG GCAAAGATAA ATACAGTATT TCGGCCAGTA TAAAAGGTGA TGAAGCGTTG
AACCCCGCCC ACCGGACGGC GTTGATTATG CCGATTTGTA ATGAGGACGT GGAGCGGGTA
TTCGCCGGTC TGCGGGCTAC TTATGAATCG GTAGCGGCAA CGGGTCAGCT TGATCACTTT
GATATTTACG TGTTGAGTGA CAGCGATGAT CCCGATATCT GTGTGGCAGA GCAGAAGGCT
TGGCTGGAGC TATGCCGCGA TGTCGAGGGC CATGGGCGTA TTTTCTATCG GCGTCGTCGG
CGGCGGGTTA AGCGTAAAAG TGGCAATATT GATGATTTCT GCCGTCGTTG GGGCAGCGAA
TACAGCTATA TGGTCATTCT GGATGCCGAT AGCGTCATGA GCGGTGAATG TCTGACCGGG
TTGGTGCGGC TGATGGACGC TAATCCTAAC GCCGGGATTA TTCAATCAGC GCCTAAAGCC
TCGGGGATGG ACACGCTATA TGCCCGTATT CAGCAGTTTG CGACCAGGGT CTATGGGCCT
TTGTTTACTG CCGGTTTACA TTATTGGCAG CTAGGTGAAT CACATTACTG GGGCCATAAC
GCCATCATTC GGGTGAAACC TTTTATCGAG CATTGTGCGT TAGCACCGTT GCCGGGTGAA
GGGTCTTTTG CCGGAGCTAT CTTGTCACAT GACTTTGTGG AAGCGGCACT GATGCGCCGT
GCAGGGTGGG GGGTGTGGAT TGCCTATGAC TTGCCCGGCA GTTATGAAGA GTTGCCACCT
AACTTGTTGG ACGAATTAAA GCGTGATCGC CGCTGGTGTC ACGGTAATTT GATGAATTTC
AGGCTGTTTC TGGTAAAAGG AATGCACCCG GTACACCGTG CTGTGTTCCT CACCGGTGTG
ATGTCATACC TATCGGCACC GCTGTGGTTT ATGTTTTTGG TGCTGTGTAC TGCCTTGCAA
ACCGTGCACA CACTGATGGA GCCGCAATAC TTCTTGCAAC CGCGCCAGTT ATTCCCGGTG
TGGCCTCAGT GGCGGCCAGA ATTGGCGATT GGTTTGTTCT CCACCACCTT GGTATTGCTG
TTTTTACCGA AGTTGCTCAG TATCGTTTTG ATCTGGGCGA AAGGTGCGAA AGCCTATGGC
GGTGCGTCGC ATCTGCTCCT TTCCATGCTG TTGGAAATGT TGTTTTCGGT ACTACTGGCC
CCGGTACGTA TGTTGTTCCA TACGGTATTC GTCGTCAGCG CTTTTCTGGG ATGGTCGGTA
CAGTGGAATT CGCCACAGCG TGATGACGAT GCGACCCCCT GGAGTGAGGC GCTGGTTCGC
CATGGTTCGC AATTGTTGCT AGGGGTCGTC TGGGCGGGGG GGGTTGCCTG GTTGGATCTG
CGCTTTTTGT GGTGGTTATC GCCAATTGTC TTTTCGTTGA TCTTGTCACC GGTGGTGTCT
GTATTGTCCA GCCGACGGAC ATTGGGGCTG GCCAGTAAGC AGGAAAAATT GTTCCTGATA
CCAGAGGAGT ATGATCCGCC ACGGGTGCTG CTTGCCACAG AGGAGTACCT GAAACTGAAC
CATCAACGCG CGTTGAGCCA TGGCTTTATA CATGCGGTGA TGAATCCCTC GTATAACGCG
TTGGTCAGTG CGATGGCAAC GGCTCGCCAT CATTCCAAGG CGATTATCGA ACAGGTTCGT
ACCCAGCGAG TGACAGCCGC ATTAACCGCA GGGCCGGATA ATCTGGAGAA AGAACAGCAA
CTGATATTGC TCAGCGATCC GGTACTGATT TCCCGTTTGC ATCAGCAGAT TTGGCAGCAG
CCGGAGACGT ATCAGAGATG GAATGGCTAT TACCGTCAGC GAGCACATAA CGTAGGGGTA
TTTCCCGCAA TTGAGTATCA AAATCAGTAG
|
|---|
| Protein sequence | MNKLTQTPIQ DYIADLPLTA QQQEALRAAF PDNMLLDSSP DAMRRLHQRL ACTGHQAHSG
VAGDPAEEDS ALVSVKARLQ AAWPEVLKGE NVLGQDSEGR TVIHAVPPIK RTSMAPQAWR
TNPVGRFWDR LRGQTPVLPA ETHEQAVAEK KWRSVGSLRR YILLILIVLQ TTIATRYMKT
ILPYQGWALI DPFDIWQQNW QISVMQLLPY LLQTGVLILF AVLFCWVSAG FWTALMGFLQ
LLTGKDKYSI SASIKGDEAL NPAHRTALIM PICNEDVERV FAGLRATYES VAATGQLDHF
DIYVLSDSDD PDICVAEQKA WLELCRDVEG HGRIFYRRRR RRVKRKSGNI DDFCRRWGSE
YSYMVILDAD SVMSGECLTG LVRLMDANPN AGIIQSAPKA SGMDTLYARI QQFATRVYGP
LFTAGLHYWQ LGESHYWGHN AIIRVKPFIE HCALAPLPGE GSFAGAILSH DFVEAALMRR
AGWGVWIAYD LPGSYEELPP NLLDELKRDR RWCHGNLMNF RLFLVKGMHP VHRAVFLTGV
MSYLSAPLWF MFLVLCTALQ TVHTLMEPQY FLQPRQLFPV WPQWRPELAI GLFSTTLVLL
FLPKLLSIVL IWAKGAKAYG GASHLLLSML LEMLFSVLLA PVRMLFHTVF VVSAFLGWSV
QWNSPQRDDD ATPWSEALVR HGSQLLLGVV WAGGVAWLDL RFLWWLSPIV FSLILSPVVS
VLSSRRTLGL ASKQEKLFLI PEEYDPPRVL LATEEYLKLN HQRALSHGFI HAVMNPSYNA
LVSAMATARH HSKAIIEQVR TQRVTAALTA GPDNLEKEQQ LILLSDPVLI SRLHQQIWQQ
PETYQRWNGY YRQRAHNVGV FPAIEYQNQ
|
|---|
| |