| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1636 |
|---|
| Symbol | |
|---|
| ID | 6087449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 1813665 |
|---|
| End bp | 1814489 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641596706 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001720382 |
|---|
| Protein GI | 170023877 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA ACATCAACAG TTTAATTATC CATCTGGTTA TGTTTTCTCT GGCGCTTTCG
TGGCTCTATC CCTATATCTG GATGGTGCTT TCTTCCTTTA AACAGTCTGC CGATATTTAT
ACTACCGGGC TGTTTGGTAG CGCTTACTCA CTCGATAATT ACCGTTTTTT GTTTGAAAAC
AGTGGTCGGG TGGAAAAACC TTTTTTAAAG ACGCTATTTA ACTCACTCTT TATTTCAACA
GTAGTGACGG TAGCCGTTAC CCTTAGCTCC ATGTTTATTG GATTTGCGCT GGCAAAAATG
CAATTTAAAG GCCAGTCCCT GTTTAGGAAT TTACTGTTTT TACAAATGGT TTTCCCTGCG
TCGATGTTTA TCATCCCGCA ATTCGTTTTA GTCAGAGAAC TGGGGTTATT AAACACCTAT
AGCGCCATGA TTGTTCCTTT TCTCATGAGT TCTTGGGGGA TCTTTATGAT TTCACAGAGC
TTCCAGGGGA CGCCGAATGA TTATATTCAT GCGGCCAAAA TTGATAATGC TAGTCTGTGG
CAAATTATGA TTTACCTGAT GATGCCGCTG AATAAAGCAA TTATCGCCAT TGTGGCATTG
TTTACCTTTG TCGGCACATG GGACAACTTC TTATGGCCAC TGATTGTTAT CCAGGATGAA
AGCAAAATGC CGCTCTCGGT ATTACTGGCC ACATTCAGCA AATCTTATGG CGTTTATGTT
GGGCCAGTGA TCGCTGGTGC GGTCATTCAG ACCATCCCGA TCGTCGTACT GTTTATTTTA
TTCCGTAAAT ATTTCATGCA GGGCATGTCC CTATCATTAA AGTAG
|
|---|
| Protein sequence | MKKNINSLII HLVMFSLALS WLYPYIWMVL SSFKQSADIY TTGLFGSAYS LDNYRFLFEN
SGRVEKPFLK TLFNSLFIST VVTVAVTLSS MFIGFALAKM QFKGQSLFRN LLFLQMVFPA
SMFIIPQFVL VRELGLLNTY SAMIVPFLMS SWGIFMISQS FQGTPNDYIH AAKIDNASLW
QIMIYLMMPL NKAIIAIVAL FTFVGTWDNF LWPLIVIQDE SKMPLSVLLA TFSKSYGVYV
GPVIAGAVIQ TIPIVVLFIL FRKYFMQGMS LSLK
|
|---|
| |