Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1628 |
Symbol | |
ID | 6088163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1805723 |
End bp | 1806124 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641596698 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001720374 |
Protein GI | 170023869 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCACA TTGATTCGTT GTGTGCAGGT ATGGATATGT CAGCATTTGC AGAGCGCCTT CGCCTGTTGC TTGAAGCCCG TAATCTTAGT CAGGTCAGAC TTTCAGAACT TCTGGGCGTT GATCCCTGTG CCTATAACCG CTGGGAGAAA GGCGCTACTG CGCCTCACCT AGATACGGTG ATTAAAATTG CCGATGTGCT ACAGGTGACG CTGGATGAAC TGGTGGGCCG TAAGGCTGTT TCGGAAGAAG TAAAGATCCA CAACCATACG CTGCATACCC TGTGGCAGAA GGCAGATATG TTGCCGGATT CCGATCAGCA GCCATTGATT GCCGTGCTGG ACAGTTTTGT TAAGAAGTCG ATGGTTGAAC AGGTAATTGG ATTTAACAGT AACAGACGTT AA
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Protein sequence | MSHIDSLCAG MDMSAFAERL RLLLEARNLS QVRLSELLGV DPCAYNRWEK GATAPHLDTV IKIADVLQVT LDELVGRKAV SEEVKIHNHT LHTLWQKADM LPDSDQQPLI AVLDSFVKKS MVEQVIGFNS NRR
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