| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1621 |
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| Symbol | |
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| ID | 6089083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1793572 |
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| End bp | 1795260 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641596691 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_001720367 |
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| Protein GI | 170023862 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGTTATT GTTATTTTAT ATTACACACG GCTATATTAT TTCCACTGTT GGTTATTTCT
CGCGCCGGAC AGAGTGCGGA ATTAACGCCT ATTCAACAGC AAACTCTCCA TCAGCAAGAG
CGGCAGCGGG CGCTGGAAGA ACGTCTGGCT CCGCCGACGC CAGATGTGCG CTTATCTGCA
CCTTCGGCCT CTTCGGATCG CCTTATTTTC CCTGTGGAAA AGCCCTGCTT TGTTATTGAC
CGCGTCACAC TCAGCGGCAC TGAACCGTTA CCCCGTTGGT TGCCGTTACA GCGTATTGCT
AATCAGGCTC TAGGTCAGTG TTTGGGCGGG CAGGGGATTA ACCAATTGAT GAGCCAATTA
CAAAACCGTT TAGTGGGTCA TGGTTATGTG ACGACCCGGG TGCTTGCTCC GCAGCAGGAT
TTGAACAGCG GCACACTGGC GTTACAAGTG GTGCCCGGCA AAATACACCG CGTGGCGCTG
ACACCAGAGA GTGACCGCCA TGTCACACTG TTCAGTGCCT TTCCCGCACG CCCCGGTCAC
TTATTGGATC TGCGTGATAT TGAGCAAGGG CTGGAGAATC TTCAACGTAT CCCCACAGTG
CAAGCCAGCA TGGAATTGAT CCCCGGCAGC GCGCCCGGAG AGACCGATAT CGCCCTAAGC
TGGAAGCAGA GCAAAATGTG GCGTTTGGCC GCCTCACTGG ATGACTCTGG GACTCGCAGT
ACTGGCCGTT ATCAGGGCGG TGCGACGCTG TTTCTGGATA ACCCATTCTC TTTGAGTGAC
CAGTTTTATG TCTCGGCGGG TGGCTCAATA AAAAATCGCG GCGATAAAGG CACCAATAAC
CTGACTGGCC ACTACTCATT GCCGTTCGGT TACTGGACAG CCGGCATAAC CGCCAGCAGT
TATGATTATC ACCAGACAGT GGCGGGCCTG AATAGCGATT ACAACTATCG GGGCGAAAGT
GAAAATGTGT CATTGCAACT CAGCCGCCTG TTGCACCGCA ATGCCAGCCA AAAAACCACA
CTCACCTACG ATGTCCTGAC CCGTTCGTCG AAAAACTACA TCAATGATAC CGAAGTTGAG
GTTCAACGCC GCCGCACATC TGCCTGGCGC ATAGGGCTGC AACATCGCCA CTTTATTTCG
CAGGCCACGC TGGATGCCGG GGTGAGTTAT CAGCGCGGTA CCCGTTGGTT TGGGGCGGTT
CCGGCTCAAG AAGAATATTT TGATGAAGGC ACGGCGTTAA GCAAGATTCT GCAATTGAAT
GCACAACTGG ATATTCCCTT CTCGGTGATG GCGCAAAATT TCCATTACAA CGTGCAATAC
CAGCGTCAGA GCAGCAGCAC CCCGTTGACC CCACAGGATC AATTCAGCAT CGGTGGCCGT
TGGTCAGTGC GCGGCTTTAA TGGGGAGCGG ACCCTCAGTG CTGATCGTGG CTGGACGGTG
CGTAATGATC TGGGTTGGTA CACACCGATA CAGGGGCAAG AGATCTATGT CGGCCTTGAT
TATGGCGAAG TGGGTGGCCG CGGAAGCGCT TATCTGCTGG GTAACCATCT GGCAGGTGCC
GCTGTCGGTA TTCGCGGCAA CGTACTCAAT ACCCGCTATG ACCTGTTTGC CGGCAAACCC
CTGTCTGAAC CCGATGGCTT CCAATCCGAT GCCGTGACCG TGGGCTTTAA CCTGAACTGG
CAATACTAA
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| Protein sequence | MRYCYFILHT AILFPLLVIS RAGQSAELTP IQQQTLHQQE RQRALEERLA PPTPDVRLSA
PSASSDRLIF PVEKPCFVID RVTLSGTEPL PRWLPLQRIA NQALGQCLGG QGINQLMSQL
QNRLVGHGYV TTRVLAPQQD LNSGTLALQV VPGKIHRVAL TPESDRHVTL FSAFPARPGH
LLDLRDIEQG LENLQRIPTV QASMELIPGS APGETDIALS WKQSKMWRLA ASLDDSGTRS
TGRYQGGATL FLDNPFSLSD QFYVSAGGSI KNRGDKGTNN LTGHYSLPFG YWTAGITASS
YDYHQTVAGL NSDYNYRGES ENVSLQLSRL LHRNASQKTT LTYDVLTRSS KNYINDTEVE
VQRRRTSAWR IGLQHRHFIS QATLDAGVSY QRGTRWFGAV PAQEEYFDEG TALSKILQLN
AQLDIPFSVM AQNFHYNVQY QRQSSSTPLT PQDQFSIGGR WSVRGFNGER TLSADRGWTV
RNDLGWYTPI QGQEIYVGLD YGEVGGRGSA YLLGNHLAGA AVGIRGNVLN TRYDLFAGKP
LSEPDGFQSD AVTVGFNLNW QY
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