| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1616 |
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| Symbol | |
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| ID | 6088255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1787273 |
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| End bp | 1788358 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641596686 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_001720362 |
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| Protein GI | 170023857 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.409343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAA CCTACCGAAT TGCCGCCATA CCCGGGGACG GTATCGGCCA TGAAGTGATG
CCAGAAGGGA TCAACGTGCT CCAGGCCGCC GCTTTGCGCT GGGATTTAGA TATTTCATTT
GAAAATATTG AATGGGCAAG TTGTGAATAT TATCAACACC ATGGGCAGAT GATGCCGAAT
GATTGGCAGA GGCAGCTACA ATGCTTCGAT GCGATTTATT TTGGTGCGGT TGGCTGGCCT
GCGACCGTGC CAGACCACAT TTCGCTGTGG GGATCGCTGT TGAAGTTTCG TCGTGATTTT
CAGCAGTATG TCAATTTACG TCCGGTGCGC TTGTTTCCTG GCATACCCTG CCCGTTAGTG
GGTAAACAGC CCGGTGATAT TGATTTTTAT GTGGTTCGGG AAAATACCGA AGGTGAATAT
TCATCGGTTG GCGGGCGTTT GTTTGAAGGC ACCGAGCAGG AAATGGTTTT ACAGGCGTCG
ATATTCACAC GCCGTGGCGT TGACCGTATT CTAAAATACG CCTTTGAATT GGCGCAGATG
CGCCCACGTA AGCGCCTGAC GTCTGCCACT AAATCTAATG GTCTGGCGTT CAGTATGCCG
TACTGGGATG AGCGCTTCGA AGTGATGGCG GCGCAGTATC CACAAATTAG CGCGGACAAA
CAGCATATTG ATATTTTGTG CGCCCGTTTT GTATTGAATC CTGAACGTTT TGATGTGGTT
GTGGCATCTA ACTTATTTGG TGATATTTTA TCTGACCTTG GCCCGGCGTG TGCGGGGACG
ATTGGCATTG CGCCTTCAGC GAACCTCAAT CCAGAGCGTG ACTTCCCTTC ACTGTTCGAA
CCGGTACATG GCTCGGCCCC TGATATTTAT AAAAGAAATA TCGCTAACCC TATTGCGATG
ATCTGGGCGG GGGCGATGAT GCTCGATTTT CTGGGGCAAG GAGATGAGCG CTATCATGCT
GCCCATAATG GAATATTAAA CGCTATTGAA CAGGTGATTG CGCAGGGCCC TAAAACGCCT
GATATGTGTG GTGATGCCTC CACCCAACAA GTGGGTTCTG CCATTGTGCA GGTCTTATCT
CACTAA
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| Protein sequence | MKKTYRIAAI PGDGIGHEVM PEGINVLQAA ALRWDLDISF ENIEWASCEY YQHHGQMMPN
DWQRQLQCFD AIYFGAVGWP ATVPDHISLW GSLLKFRRDF QQYVNLRPVR LFPGIPCPLV
GKQPGDIDFY VVRENTEGEY SSVGGRLFEG TEQEMVLQAS IFTRRGVDRI LKYAFELAQM
RPRKRLTSAT KSNGLAFSMP YWDERFEVMA AQYPQISADK QHIDILCARF VLNPERFDVV
VASNLFGDIL SDLGPACAGT IGIAPSANLN PERDFPSLFE PVHGSAPDIY KRNIANPIAM
IWAGAMMLDF LGQGDERYHA AHNGILNAIE QVIAQGPKTP DMCGDASTQQ VGSAIVQVLS
H
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