Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1613 |
Symbol | |
ID | 6088692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1783712 |
End bp | 1784704 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641596683 |
Product | monosaccharide-transporting ATPase |
Protein accession | YP_001720359 |
Protein GI | 170023854 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCAGAA CTGAACACTC TTCTTCTACG CAAGAGAGCG GTAGCACTCT CCATCGCCAT AAACGTTGGG AAAAATTATT ACATCACCCG GCCATGTTGC CATTTATTGG TTTTGTTGTG CTATTTGTCT TAATGAGCGG GTTAAATGAC AGTTTTTTGA CCGTAAATAA CCTCACTAAC GTGGCGCGGC AGGTGTCGAT TAATGCCATT ATCGCGGTAG GCATGACTTG CGCGATCTTG ACCGGGGGGA TCGATCTTTC GGTTGGGCCA GTCATGGCGT TGTCAGGGTC TATTGCTGCC GGGCTGATGC TGGCCGGTAT TCCTATTCCG TTAGCCATGA TGGCCGCTCT GTTAGTCGGT GCCTTATTTG GGCTGGCGAA TGGGAGTTGT ATTGCTTATC TGCGGATGCC GCCTATCATC GTGACGCTGG CCTCTATGGG GATCGCCCGT GGTTTGGCGT TGTTGTACAC CGGGGGGTAT CCCATCTCCG GTTTACCTGA CATGTTTTCA TTCTTTGGCC GAGGCACGGT ATTGGGTATT CAAGTCCCCA TTCTGATCAT GGCCGGTGTT TATCTGTTCG CTTGGATCAT GCTCAACCAT TTATCGTTTG GTCGCTATAT TTATGCTATC GGTGGCAACG AAGAAGCGGC GCGTTTGAGT GGTATCCGTG TGTCGCGCTA TAAAATGCTG GTATATGTGG TCAGTGGCCT GACAGCCGCG TTGGCCGGGC TGGTACTGAC TTCGCGGCTA ATGAGTGGGC AACCTAATGC GGGCGAAGGG TTTGAACTGG ACGCTATCGC CGCCGTTGTT TTGGGCGGTG CGGCAATCTC CGGAGGCAAG GGGGCGATTA TTGGTACGTT GGTAGGGGCG ATGATGTTGG GGGTGTTGAA TAATGGTCTC AACCTGATGA GCGTATCGCC TTATATCCAG AATGTCGTGA AAGGCGGCAT TATTCTTGCG GCGATCTATC TCAGTTCCGT TCGGCGCAAA TAA
|
Protein sequence | MIRTEHSSST QESGSTLHRH KRWEKLLHHP AMLPFIGFVV LFVLMSGLND SFLTVNNLTN VARQVSINAI IAVGMTCAIL TGGIDLSVGP VMALSGSIAA GLMLAGIPIP LAMMAALLVG ALFGLANGSC IAYLRMPPII VTLASMGIAR GLALLYTGGY PISGLPDMFS FFGRGTVLGI QVPILIMAGV YLFAWIMLNH LSFGRYIYAI GGNEEAARLS GIRVSRYKML VYVVSGLTAA LAGLVLTSRL MSGQPNAGEG FELDAIAAVV LGGAAISGGK GAIIGTLVGA MMLGVLNNGL NLMSVSPYIQ NVVKGGIILA AIYLSSVRRK
|
| |