Gene YPK_1606 details

Gene Information

• Locus tag: YPK_1606
• Symbol: ompX
• ID: 6091319
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 1775765
• End bp: 1776289
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641596676
• Product: outer membrane protein X
• Protein accession: YP_001720352
• Protein GI: 170023847
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3637] Opacity protein and related surface antigens
• TIGRFAM ID: [TIGR03304] outer membrane insertion C-terminal signal

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.0413281
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA TTGCATGTCT TTCAGCGGTA GCAGCGTGTG TGTTAGCCGT GACCGCAGGT 
TCTGCCTTTG CAGGTCAAAG CACCGTTTCT GGTGGTTATG CCCAGAGCGA TTATCAAGGT 
GTTGCGAACA AGTCTTCAGG TTTTAACCTG AAATACCGTT ATGAGTGGAG TGACTCTCAA 
CTGGGTTACA TCACCTCTTT CACTCACACT GAAAAAAGCG GTTTCGGTGA CGAAGCGGTT 
TACAACAAAG CGCAATATAA TGCGATTACC GGTGGTCCAG CATACCGCAT CAATGATTGG 
GCTAGCATTT ATGGTCTGGT CGGTGTGGGT CATGGTCGTT TCACCCAAAA CGAGTCAGCA 
TTCGTTGGTG ATAAACACAG CACCAGTGAC TACGGCTTCA CCTACGGTGC TGGCTTGCAG 
TTCAACCCAG CCGAAAACGT TGCTCTGGAT GTTTCTTACG AGCAGAGCCG TATCCGTAAC 
GTTGACGTAG GTACTTGGGT TGCTGGCGTA GGTTACACTT TCTAA 

 

Protein sequence

MKKIACLSAV AACVLAVTAG SAFAGQSTVS GGYAQSDYQG VANKSSGFNL KYRYEWSDSQ 
LGYITSFTHT EKSGFGDEAV YNKAQYNAIT GGPAYRINDW ASIYGLVGVG HGRFTQNESA 
FVGDKHSTSD YGFTYGAGLQ FNPAENVALD VSYEQSRIRN VDVGTWVAGV GYTF