Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1603 |
Symbol | |
ID | 6088459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1773161 |
End bp | 1773937 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641596673 |
Product | trans-aconitate 2-methyltransferase |
Protein accession | YP_001720349 |
Protein GI | 170023844 |
COG category | [R] General function prediction only |
COG ID | [COG4106] Trans-aconitate methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.463552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGATT GGGATCCTGA TTTATATCGT CAATTTGAAG CCGAGCGCAC CCGCCCAGCC ACTGATCTAT TAGCGCATAT CACGATAACC TCGCCGCAGT TCATCAGCGA TTTAGGCTGT GGGCCAGGTA ACTCGACTGA ATTACTGCAT CGACGTTTTC CAGATGCCCA ATTGGTTGGT ATTGATCATT CTCAGGCAAT GTTAGCCAGT GCACAGCAAC GCCTGCCACA TTGCACCTTT ATTGAGGCGG ATATCCACCA ATGGCGCCCT TCACAGCCGC AGAACCTTAT CTATGCTAAC GCCTCATTAC AGTGGCTAAC CGATCACCCG CATCTGTTCC CGTCCCTGCT TTCACAGCTA GCCCCAAGAG GGGTGCTGGC GGTTCAGATG CCGGATAATC TGGATCAACC CAGCCATCGC GCTATGCGGG AAGTGGCCGA GAACGGCCCA TGGCAACAAA CCTTACAAGA AGCCGGCGCA ACACGGGCGA AAGTGCTCTC GGCCAATCAC TATTATGATT TACTGGCTCC CCACGCTGAG CGAGTCGATA TTTGGCGTAC AACCTATTAC CACCCGATGC CATCAGCGCA AGCAATTGTT GACTGGCTGC GGGCAACGGG GCTACGCCCT TATCTTGCCC CCCTGACTGA AGCCATGCAG TTGGCGTTCC TACAAAATTA TCTGGCCATC ATTGATAAGG CTTACCCCGC ACGGACTGAT GGCCGCCGCT TGTTGGCTTT CCCACGTTTA TTTATTGTCG CCCATGCTCA AAGATAA
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Protein sequence | MQDWDPDLYR QFEAERTRPA TDLLAHITIT SPQFISDLGC GPGNSTELLH RRFPDAQLVG IDHSQAMLAS AQQRLPHCTF IEADIHQWRP SQPQNLIYAN ASLQWLTDHP HLFPSLLSQL APRGVLAVQM PDNLDQPSHR AMREVAENGP WQQTLQEAGA TRAKVLSANH YYDLLAPHAE RVDIWRTTYY HPMPSAQAIV DWLRATGLRP YLAPLTEAMQ LAFLQNYLAI IDKAYPARTD GRRLLAFPRL FIVAHAQR
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