Gene YPK_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1602 
Symbol 
ID6088166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1772401 
End bp1772904 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content45% 
IMG OID641596672 
ProductDNA starvation/stationary phase protection protein Dps 
Protein accessionYP_001720348 
Protein GI170023843 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0783] DNA-binding ferritin-like protein (oxidative damage protectant) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACAG CAAAACTGGT AAAAACAAAA CCCTCCGAAC TGCTTTATAC CCGTAATGAC 
GTTGAGGAGC ATGTTAAAGT TGCTACGATT AAGCGATTGA ACCAAATGGT CATTCAGTTT
ATCGATTTGT CGCTTATCAC CAAACAGGCC CATTGGAACA TGCGCGGTGC TAACTTTGTT
GCTGTCCATG AAATGCTGGA TGGCTTCCGT ACTGCCCTTA CCGACCATCT GGATACCTTT
GCCGAGCGTG CTGTACAACT CGGTGGTGTG GCATTGGGTA CCGCACAGGT CATTAATGAT
AAAACCCCGC TAAAGAGCTA CCCAACCAAT ATCCATAGCG TGCAAGAGCA CCTAAAAGCA
TTAGCCGAGC GCTATGCGAT AGTCGCAAAC GATATTCGTA AAGCGATAAC CGAAGTTGAA
GATGAAAACA GTGCGGACAT GTTTACTGCC GCTTCCCGTG ATCTGGATAA ATTCTTGTGG
TTTATCGAGT CAAATATTGA GTGA
 
Protein sequence
MSTAKLVKTK PSELLYTRND VEEHVKVATI KRLNQMVIQF IDLSLITKQA HWNMRGANFV 
AVHEMLDGFR TALTDHLDTF AERAVQLGGV ALGTAQVIND KTPLKSYPTN IHSVQEHLKA
LAERYAIVAN DIRKAITEVE DENSADMFTA ASRDLDKFLW FIESNIE