Gene YPK_1596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1596 
Symbol 
ID6087153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1764969 
End bp1765934 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content49% 
IMG OID641596666 
Productputative SAM-dependent methyltransferase 
Protein accessionYP_001720342 
Protein GI170023837 
COG category[R] General function prediction only 
COG ID[COG3129] Predicted SAM-dependent methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATA AAAAAGTATT CCCCAAAGAA AAAAGCGGAT TGCATCCCCG AAACCGTCAT 
CGCTCACGCT ATGATTTTGA TGCGCTTTCA GTGAGTTGCC CTGAGCTAAT CCCTTTTTTG
GCCCCGACCG CCTATGGTGA TATTTCTGTC GATTTTGCTG ATCCATTAGC AGTAAAAATG
TTGAATAAGG CATTATTAAA ACATTTCTAT GGCATTGAAT ATTGGGATAT TCCAGCCGAT
TCTTTATGTC CTCCCATTCC TGGGCGTGCC GATTACGTGC ACCATCTGGC CGATCTATTA
GCCAGTTGCA ATGGCGAGGT GATCCCTAAG GGCAAGAATA TTGCGTTGCT GGATATTGGC
GTCGGCGCTA ACTGTATTTA TCCAATTATT GGTCAGCGGG AGTACGGCTG GCGCTTTACC
GGTACGGATA TTGACTCACA CGCGCTCAGT GCGGCAAAAA TGGTGGTGTC GATGAATCCG
ACCCTGAAAA ATACCTTGCG CCTGAAGCAG CAAAAAGATC CACACGCTAT TTTTGAAGGG
GTGTGGGCGG TGAATGAGCG TTACGATGCG ACGCTGTGTA ACCCGCCATT CCATGGTTCA
GCAGAAGAAG CGGCGGCCAC CACTCGCCGT AAATTGCACA AACTGGGGAA AAATGAAGTC
GCTGCAAAGC CAGTACAGAA CTTCGGTGGT AAAAACAGTG AGTTATGGTG TGAAGGTGGG
GAGGAAGGGT TTGTCAGCCG CATGGTGGCA GAGAGCGTAG CGAAAGCGCA GAACTGCTTC
TGGTTTACCT CATTGATTTC CAAGAAGACC ACGTTACCGG CGATTTATCA TGCGTTAAGA
TATGTGAAGG CAGTTGAGGT GCGCACTATT GAGATGGCGC AAGGGCAAAA AGTCAGTCGG
TTTGTGGCCT GGACGTTCCT GACGCCCGAG CAGCAAGCCG CGTGGGTTGC AGAGCGCTGG
GCATAA
 
Protein sequence
MENKKVFPKE KSGLHPRNRH RSRYDFDALS VSCPELIPFL APTAYGDISV DFADPLAVKM 
LNKALLKHFY GIEYWDIPAD SLCPPIPGRA DYVHHLADLL ASCNGEVIPK GKNIALLDIG
VGANCIYPII GQREYGWRFT GTDIDSHALS AAKMVVSMNP TLKNTLRLKQ QKDPHAIFEG
VWAVNERYDA TLCNPPFHGS AEEAAATTRR KLHKLGKNEV AAKPVQNFGG KNSELWCEGG
EEGFVSRMVA ESVAKAQNCF WFTSLISKKT TLPAIYHALR YVKAVEVRTI EMAQGQKVSR
FVAWTFLTPE QQAAWVAERW A