| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1591 |
|---|
| Symbol | |
|---|
| ID | 6087383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 1759738 |
|---|
| End bp | 1760595 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641596661 |
|---|
| Product | naphthoate synthase |
|---|
| Protein accession | YP_001720337 |
|---|
| Protein GI | 170023832 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0447] Dihydroxynaphthoic acid synthase |
|---|
| TIGRFAM ID | [TIGR01929] naphthoate synthase (dihydroxynaphthoic acid synthetase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTATC CGAGCGAAGA ACAATTGTAC GCCGCCATCG ACTGGCTGGA TTGCTCCGCC
GGATTTGAAG ATATTCGTTA TCACAAATCC AACGATGGTA TTGCCAAGAT CACCATTAAC
CGCCCACATG TGCGTAATGC GTTCCGCCCA TTAACCGTTA AAGAGATGAT CCAGGCGCTG
GCCGATGCCC GTTATGACGA CAATATCGGT GTGATTATTT TGACGGGGGA AGGCGATAAA
GCCTTCTGTT CCGGCGGTGA TCAGAAAGTG CGTGGCGATT ACGGCGGCTA TCAGGATAAC
AGTGGTGTTC ATCACCTGAA CGTACTGGAT TTCCAACGTC AGATCCGCAC CTGTCCAAAA
CCGGTGGTCG CGATGGTGGC CGGCTATTCT ATTGGCGGCG GGCATGTATT GCATATGATG
TGTGATTTAA CCGTTGCGGC AGATAATGCC ATTTTTGGTC AGACGGGACC GAAAGTCGGT
TCATTCGACG GCGGTTGGGG TGCGGCGTAT ATGGCGCGGA TTGTCGGCCA GAAAAAAGCG
CGGGAAATTT GGTTCCTGTG CCGCCAATAT GATGCCAAAC AAGCTCTGGA TATGGGGCTG
GTCAATACCG TGGTCCCCCT GGCAGATCTC GAAAAAGAAA CTGTGCGTTG GTGCCGTGAA
ATGCTGCAAA ACAGCCCGAT GGCGCTGCGT TGTCTGAAAG CAGCGCTGAA TGCGGATTGC
GATGGTCAGG CGGGTTTGCA GGAGTTAGCC GGTAACGCCA CCATGCTGTT CTATATGACC
GATGAAGGGC AGGAGGGGCG TAACGCATTC AATGAAAAAC GCCAGCCGGA CTTCAGCAAA
TTCAAGCGTA ATCCGTAA
|
|---|
| Protein sequence | MLYPSEEQLY AAIDWLDCSA GFEDIRYHKS NDGIAKITIN RPHVRNAFRP LTVKEMIQAL
ADARYDDNIG VIILTGEGDK AFCSGGDQKV RGDYGGYQDN SGVHHLNVLD FQRQIRTCPK
PVVAMVAGYS IGGGHVLHMM CDLTVAADNA IFGQTGPKVG SFDGGWGAAY MARIVGQKKA
REIWFLCRQY DAKQALDMGL VNTVVPLADL EKETVRWCRE MLQNSPMALR CLKAALNADC
DGQAGLQELA GNATMLFYMT DEGQEGRNAF NEKRQPDFSK FKRNP
|
|---|
| |