| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1590 |
|---|
| Symbol | |
|---|
| ID | 6091357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 1758906 |
|---|
| End bp | 1759724 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641596660 |
|---|
| Product | acyl-CoA thioester hydrolase YfbB |
|---|
| Protein accession | YP_001720336 |
|---|
| Protein GI | 170023831 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAC TGGCTTGCCA AAAACTGGCC CCTCATCCGG AATCGCCCCG CCATCAACAC
GCCGGGCCTT GGTTGGTTTG GTTACATGGT TTGTTGGGCA GCGGGCAAGA TTGGCTGCCC
GTGGCACAAC TGTGTGGCGA TTATCCGTCA TTGTTGATCG ACCTACCGGG CCATGGACAA
TCCGTCTCCC TGAGCGCCGA TGGTTTTGCC GATATCAGTC GCCAGTTGTC ACAAACATTA
CAGGCTAACG GTATTCGCGA ATACTGGCTG GCCGGCTACT CTTTAGGCGG TAGGATCGCG
ATATATCACG CCTGTTATGG TCGCCATCAT GGCTTGCAGG GGTTATTGGT TGAAGGGGGA
AACCTCGGGC TGGAAAACGC TGAACTACGT CAGGCGCGGT TGCAACAAGA CCGCCAATGG
GCGCAGCGCT TTCGCCAGGA GCCTCTGCCA CAGGTATTGG ATGACTGGTA TCAGCAGGCG
GTATTTGCCG ATTTAGATCC ACAACAACGT GAACAACTGG TGTTATTGCG GGCCGATAAC
CATGGCACGG CTGTGGCCGA GATGCTAGAG GCAACGTCAC TAGGGCATCA ACCGTGGTTG
TTACCGGCCC TGCAACGGCT CAACGTCCCT TATACTTATT TGTGTGGTGA TCGTGACCAT
AAGTTCCTGC AACTGGCACA GCAATATCGA TTGCCATTAC ACACGCTAGC CCGCGCCGGG
CACAATGCCC ATCGGGCGAA TCCCGGTGCT TTTGCTGCAC AGGTGCTGGC ATTTTTGTCA
CAGTCATCAT GTTTACCACC GTCATCATTA TCTCGTTAA
|
|---|
| Protein sequence | MTTLACQKLA PHPESPRHQH AGPWLVWLHG LLGSGQDWLP VAQLCGDYPS LLIDLPGHGQ
SVSLSADGFA DISRQLSQTL QANGIREYWL AGYSLGGRIA IYHACYGRHH GLQGLLVEGG
NLGLENAELR QARLQQDRQW AQRFRQEPLP QVLDDWYQQA VFADLDPQQR EQLVLLRADN
HGTAVAEMLE ATSLGHQPWL LPALQRLNVP YTYLCGDRDH KFLQLAQQYR LPLHTLARAG
HNAHRANPGA FAAQVLAFLS QSSCLPPSSL SR
|
|---|
| |