Gene YPK_1582 details

Gene Information

• Locus tag: YPK_1582
• ID: 6090561
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 1750745
• End bp: 1752601
• Gene Length: 1857 bp
• Protein Length: 618 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641596652
• Product: phosphogluconate dehydratase
• Protein accession: YP_001720328
• Protein GI: 170023823
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase; [TIGR01196] 6-phosphogluconate dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.197578
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCCCA TTATCACCCG TGTCACGCAG CGTATCATTG CGCGCTCAGC GGCCACACGC 
ACGGCATATC TGCAACGTAT CAGTGCAGCA AAAGAGCATA CCGTTCACCG TTCACAACTG 
GCTTGCGGTA ACCTGGCGCA CGGCTTTGCG GCTTGTCAGC CAGAGGATAA AGCGGCCCTA 
AAAAATAGGG TGCGTAGCGA TATCGCCATC ATTACGTCCT ATAACGATAT GCTGTCTGCT 
CATCAACCTT ATGAACATTA CCCACAACAA CTGAAAGACG CATTGCATGA GGTTGGGGCC 
ATTGGGCAGG TTGCCGGTGG GGTTCCTGCC ATGTGTGATG GGGTGACGCA AGGGCAGGAT 
GGGATGGAGT TGTCGCTAAT GAGCCGCGAT GTGATTGCTA TGTCAGCGGC TATTGGCCTG 
TCACACAATA TGTTTGATGG TGCTCTCTAC CTCGGTGTGT GCGATAAAAT CGTTCCCGGT 
TTGTTAATGG CAGCGCTGTC ATTTGGCCAT TTACCGGCTA TTTTTGTCCC CGCCGGGCCT 
ATGGCCAGCG GTTTGCCTAA CAAAGAGAAA GTCCGGATCC GCCAACTTTA CGCCGAGGGG 
AAAGTGGATA GGCAAGCCTT GTTGGAGGCT GAAGCCGCTT CGTATCACAG TGCCGGGACC 
TGTACTTTTT ACGGTACAGC CAATTCTAAT CAGATGGTGA TGGAAGTGAT GGGGCTGCAT 
TTGCCGGGAG CCTCTTTTAT CCAACCGAAT ACGCCACTGC GTGATGCGCT GACTGCAGCG 
GCGGCACGTC AAATCACCCG TCTGACCGAA ACTGGCATCA ATTGTATTGA TAGCAATCAT 
ATTGATGTTA ACCATATCAA CAACAGCTAT TTGCCTGTTG GCCAATTGGT GGATGAAAAA 
GTGGTCGTCA ATGGGATTGT CGCGCTGTTG GCAACCGGCG GTTCGACTAA TCACACCTTA 
CATTTGGTCG CGATGGCGCG GGCGGCGGGC ATCATCATTA ATTGGGATGA TTTCTCTGAA 
CTGTCGGAAG CGGTGCCGCA GCTATGCCGT ATTTACCCTA ATGGCTCCGC GGACATCAAC 
TATTTTCAGG CATCGGGTGG TGTGGCACTG CTGGTTAATA TGCTATTGCA AGGTGGTTTA 
CTGCACGAAG AGGTGCATAC CGTCGCTGGA TTTGGTTTGC AGCGTTATAC GCAAGAGCCT 
TATCTGGCGG CGGGTAAATT ACAATGGCGT CCTGGGCCGC AACAGTCACT GGATGCGACG 
GTGATCGCCA GTCTGGAACA GCCTTTTTCT GCTCAGGGGG GGACGAAAGT ATTAAACGGC 
AATCTGGGGC GGGCGGTAAT GAAAACCTCG GCAGTGCCAC GGGAGCATCA GGTTATTGAA 
GGGCCAGCGC GGGTATTTGA GAGTCAGCAT GATGTGGAAG CCGCCTTTGA ATCCGGTGAT 
TTGGATCGCG ATTGTGTGGT GGTGGTGCGC TATCAGGGGC CGCAGGCCAT TGGTATGCCG 
GAGTTACATA AGCTGATGCC GCCGCTAGGA GTATTACTTG ATCGTGGCTT TAAGGTGGCG 
TTGGTGACGG ATGGCCGATT ATCCGGCGCA TCAGGCAAGG TGCCGTCTGC CATTCACGTG 
ACGCCAGAAG CCTATTGCGG TGGTTTACTG GCCAACGTCC GCAATGGTGA CCGGATTCGG 
GTTGATGGGG TCAGTGGCGA GCTGTCATTA CTGGTGGATG AGGCTGAATT GGCCACTCGC 
GATAGTCCGT TACCGGCTAT CTCTGCTTTC CATGTGGGAT GTGGCCGTGA GTTGTTTGGG 
GCATTACGTG AACAGCTTTC TGGTGCAGAG CAGGGGGCGT GTTGTATTCG TTTCTAA 

 

Protein sequence

MNPIITRVTQ RIIARSAATR TAYLQRISAA KEHTVHRSQL ACGNLAHGFA ACQPEDKAAL 
KNRVRSDIAI ITSYNDMLSA HQPYEHYPQQ LKDALHEVGA IGQVAGGVPA MCDGVTQGQD 
GMELSLMSRD VIAMSAAIGL SHNMFDGALY LGVCDKIVPG LLMAALSFGH LPAIFVPAGP 
MASGLPNKEK VRIRQLYAEG KVDRQALLEA EAASYHSAGT CTFYGTANSN QMVMEVMGLH 
LPGASFIQPN TPLRDALTAA AARQITRLTE TGINCIDSNH IDVNHINNSY LPVGQLVDEK 
VVVNGIVALL ATGGSTNHTL HLVAMARAAG IIINWDDFSE LSEAVPQLCR IYPNGSADIN 
YFQASGGVAL LVNMLLQGGL LHEEVHTVAG FGLQRYTQEP YLAAGKLQWR PGPQQSLDAT 
VIASLEQPFS AQGGTKVLNG NLGRAVMKTS AVPREHQVIE GPARVFESQH DVEAAFESGD 
LDRDCVVVVR YQGPQAIGMP ELHKLMPPLG VLLDRGFKVA LVTDGRLSGA SGKVPSAIHV 
TPEAYCGGLL ANVRNGDRIR VDGVSGELSL LVDEAELATR DSPLPAISAF HVGCGRELFG 
ALREQLSGAE QGACCIRF