Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1579 |
Symbol | |
ID | 6087130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1747561 |
End bp | 1748511 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641596649 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
Protein accession | YP_001720325 |
Protein GI | 170023820 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.307715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACA GCAAACAAGC CGTATTGATA ATCGCTCCGG TAATGGACTA TCTGACTGAA AAGTTGGAAC AAACTTTCAC CGTCCATAAA CTCTATCAGG TTACGGATCA GGCTGAATTT CTGGCAGAGC AGGGCAAGAA TATTAAAGGT ATCGTGACCA GAGGTGATAT TGGCGTCACT AATGAGGTAC TGGCGTTATT GCCTGAAGTG CAGATCATCT CAATATTTGG TGTCGGGACT GATGCCGTTG ATCTGGATTA TACCCGTGAG CGCAATATTA TCGTGACTAC CACGCCGGGT GTCTTGACGG ATGATGTGGC TGATACGGCT CTGGGGCTGA TTATTGCCAC CTCCCGCCGT TTCTATCAAG CCTCTCAGTT CCTCCGGGCA GGGGAGTGGC CGAATGGCAG CTTGCCTTTG TCGTCTAAAG TGACGGGCAA ACGCTTGGGG ATCTTTGGTA TGGGGCGTAT TGGCCGCGCT ATTGCCCGCC GTGCTGTCGG GTTTGATATG CAAATTGCCT ATACTGACAC CGTGCACGAC AGCAGTCTGC CTTATCAATA TGTGCCAGAT TTAATTAGCC TGGCAAAGCA AAGCGATATT CTGGTGGTGG CAATTTCTGG TGGAAAAGAC AGTGCGGGTT TGGTTGATAA AGCCATTTTT GCCGCGATGC CTAATCATGG GATCCTGATT AACATTGCCC GTGGCAGTAT GGTTAATCAG GATGATCTCA TCAGTGCGTT GCAACAGCAA CAGATTGGCG GTGCTGGTCT GGATGTCTTC GCCGATGAGC CTCATGTACC ACAAGCCTTG ATTGAAATGG ACAATGTATT CTTGCTGCCA CATATTGCCA GTGCGACCAC TGATACCCGG ATCCAAATGA GTGATATTGT GTTCTCAAAT ATTTTGGCCC ATTTCTCTGG CGAAACGGCA CCTACAGCGA TTACCTATTA A
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Protein sequence | MKNSKQAVLI IAPVMDYLTE KLEQTFTVHK LYQVTDQAEF LAEQGKNIKG IVTRGDIGVT NEVLALLPEV QIISIFGVGT DAVDLDYTRE RNIIVTTTPG VLTDDVADTA LGLIIATSRR FYQASQFLRA GEWPNGSLPL SSKVTGKRLG IFGMGRIGRA IARRAVGFDM QIAYTDTVHD SSLPYQYVPD LISLAKQSDI LVVAISGGKD SAGLVDKAIF AAMPNHGILI NIARGSMVNQ DDLISALQQQ QIGGAGLDVF ADEPHVPQAL IEMDNVFLLP HIASATTDTR IQMSDIVFSN ILAHFSGETA PTAITY
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