Gene YPK_1579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1579 
Symbol 
ID6087130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1747561 
End bp1748511 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content48% 
IMG OID641596649 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_001720325 
Protein GI170023820 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.307715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACA GCAAACAAGC CGTATTGATA ATCGCTCCGG TAATGGACTA TCTGACTGAA 
AAGTTGGAAC AAACTTTCAC CGTCCATAAA CTCTATCAGG TTACGGATCA GGCTGAATTT
CTGGCAGAGC AGGGCAAGAA TATTAAAGGT ATCGTGACCA GAGGTGATAT TGGCGTCACT
AATGAGGTAC TGGCGTTATT GCCTGAAGTG CAGATCATCT CAATATTTGG TGTCGGGACT
GATGCCGTTG ATCTGGATTA TACCCGTGAG CGCAATATTA TCGTGACTAC CACGCCGGGT
GTCTTGACGG ATGATGTGGC TGATACGGCT CTGGGGCTGA TTATTGCCAC CTCCCGCCGT
TTCTATCAAG CCTCTCAGTT CCTCCGGGCA GGGGAGTGGC CGAATGGCAG CTTGCCTTTG
TCGTCTAAAG TGACGGGCAA ACGCTTGGGG ATCTTTGGTA TGGGGCGTAT TGGCCGCGCT
ATTGCCCGCC GTGCTGTCGG GTTTGATATG CAAATTGCCT ATACTGACAC CGTGCACGAC
AGCAGTCTGC CTTATCAATA TGTGCCAGAT TTAATTAGCC TGGCAAAGCA AAGCGATATT
CTGGTGGTGG CAATTTCTGG TGGAAAAGAC AGTGCGGGTT TGGTTGATAA AGCCATTTTT
GCCGCGATGC CTAATCATGG GATCCTGATT AACATTGCCC GTGGCAGTAT GGTTAATCAG
GATGATCTCA TCAGTGCGTT GCAACAGCAA CAGATTGGCG GTGCTGGTCT GGATGTCTTC
GCCGATGAGC CTCATGTACC ACAAGCCTTG ATTGAAATGG ACAATGTATT CTTGCTGCCA
CATATTGCCA GTGCGACCAC TGATACCCGG ATCCAAATGA GTGATATTGT GTTCTCAAAT
ATTTTGGCCC ATTTCTCTGG CGAAACGGCA CCTACAGCGA TTACCTATTA A
 
Protein sequence
MKNSKQAVLI IAPVMDYLTE KLEQTFTVHK LYQVTDQAEF LAEQGKNIKG IVTRGDIGVT 
NEVLALLPEV QIISIFGVGT DAVDLDYTRE RNIIVTTTPG VLTDDVADTA LGLIIATSRR
FYQASQFLRA GEWPNGSLPL SSKVTGKRLG IFGMGRIGRA IARRAVGFDM QIAYTDTVHD
SSLPYQYVPD LISLAKQSDI LVVAISGGKD SAGLVDKAIF AAMPNHGILI NIARGSMVNQ
DDLISALQQQ QIGGAGLDVF ADEPHVPQAL IEMDNVFLLP HIASATTDTR IQMSDIVFSN
ILAHFSGETA PTAITY