| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1572 |
|---|
| Symbol | |
|---|
| ID | 6089677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 1738450 |
|---|
| End bp | 1739913 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641596642 |
|---|
| Product | NADH dehydrogenase subunit N |
|---|
| Protein accession | YP_001720318 |
|---|
| Protein GI | 170023813 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) |
|---|
| TIGRFAM ID | [TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAATAA CTCCTCAACA ACTGATCGCA ATGCTACCGC TGTTGATCGT CGGATTGACG
GTGGTGGTTG TGATGCTGTC CATTGCGTGG CGACGCGATC ACTTTATTAA TGCCACACTG
ACCGTCATTG GGCTTAATCT GGCGCTGCTG TCACTTTACT TTGTTGGACA GGTCGGGCCG
ATGGATGTTA CGCCGCTGAT GCGGGTTGAC GGCTATTCGA TGTTCTACAC CGGGCTGGTG
ATTATCGCCA GCTTGGCGAC CAGTACGTTT GCTTACCCTT GGTTGGTCGG CTACCCGGAT
AACCGCGAAG AGTTCTATCT GCTGGTGCTG ATTGCGGCTT TGGGCGGTAT TCTGCTCGCC
AGTGCCAATC ATCTGGCGTC GCTGTTCTTG GGTATTGAAC TGCTTACTCT GCCGCTGTTT
GGTCTGATTG GTTATGCCTA TCGCCAGAAG CGTTCACTGG AAGCCAGTAT CAAATACATG
CTGTTGTCGG CGGCGGCATC GTCATTCCTG CTGTTCGGTA TGGCGCTGTT GTATGCTGAG
TCCGGTAGCC TGTCCTTCGT AGGGTTGGGC CAGAGCCTAA GTGACTCGAT GGTGCACCAA
CCGCTGATTC TGGCGGGTCT GGGCATGATG ATTGTTGGCC TCGGCTTTAA ACTGTCGTTA
GTACCGTTCC AACTGTGGAC ACCCGATGTG TATCAGGGCG CACCTGCGCC AGTTTCCACG
TTCCTGGCGA CCGCCAGCAA GATTGCTATC TTTGCCGTAG TGATGCGCTT GTTTATGTAC
GCACCGGCGG CGGATAGCGA AGCCGTGCGT TTGGTCCTGT CGATTATTGC GGTGGCCTCG
ATCCTGTTTG GCAACCTGAT GGCGATCAGC CAGACCAACA TCAAACGCCT GTTGGGTTAC
TCCTCTATTG CCCACCTTGG TTATTTGCTG ATTGCATTGG TCGCAGTACA AACACACGAG
CTCGCATTAC CGCTGGAAAC CATCGGGGTG TATCTGGCGG GGTATCTGTT CAGTAGCCTG
GGGGCATTTG GCGTCGTTAG CCTGATGTCC AGCCCGTACA AAGGCCCAGA TGCAGAATCC
CTGTTCTCTT ACCGTGGCTT GTTCTGGCAT AAGCCTATTC TGTCTGCGGT GATGACAGTG
ATGATGTTGT CACTGGCCGG TATCCCAATG ACACTGGGCT TTATCGGTAA ATTCTTTGTG
GTGGCAATGG GGGTCAGCGC CAACTTGTGG TGGTTGACTG GCGCGGTGGT GTTAGGCAGT
GCCATCGGCT TGTACTATTA TCTGCGTGTT ACCGTCAGTT TGTTCCTCAG CCCGCCGCAG
AGCTTAGTAC GTGATACCCC AAGCAACTGG GCATTAACGG CCGGTGGCGT GGTGGTACTG
ATCTCCGCGA TTTTGGTACT GGTGTTGGGT ATCTATCCGC AACCGTTGAT AACACTGGTG
CAGATGGCTC AGCCCTTGAT GTGA
|
|---|
| Protein sequence | MTITPQQLIA MLPLLIVGLT VVVVMLSIAW RRDHFINATL TVIGLNLALL SLYFVGQVGP
MDVTPLMRVD GYSMFYTGLV IIASLATSTF AYPWLVGYPD NREEFYLLVL IAALGGILLA
SANHLASLFL GIELLTLPLF GLIGYAYRQK RSLEASIKYM LLSAAASSFL LFGMALLYAE
SGSLSFVGLG QSLSDSMVHQ PLILAGLGMM IVGLGFKLSL VPFQLWTPDV YQGAPAPVST
FLATASKIAI FAVVMRLFMY APAADSEAVR LVLSIIAVAS ILFGNLMAIS QTNIKRLLGY
SSIAHLGYLL IALVAVQTHE LALPLETIGV YLAGYLFSSL GAFGVVSLMS SPYKGPDAES
LFSYRGLFWH KPILSAVMTV MMLSLAGIPM TLGFIGKFFV VAMGVSANLW WLTGAVVLGS
AIGLYYYLRV TVSLFLSPPQ SLVRDTPSNW ALTAGGVVVL ISAILVLVLG IYPQPLITLV
QMAQPLM
|
|---|
| |