Gene YPK_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1568 
Symbol 
ID6091128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1734186 
End bp1734731 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content52% 
IMG OID641596638 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_001720314 
Protein GI170023809 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.788173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTTG CGTTTTATAT TGCAGCATTG GTGGCCGTGG TGGCGACGAT CCGCGTTATC 
ACTCACACCA ACCCGGTACA TGCGTTGCTG TACCTGATTA TCTCTTTGTT GGCTATTTCG
GCGGTGTTCT TCTCGTTGGG GGCTTATTTT GCCGGTGCGC TGGAAATCAT CGTTTACGCG
GGTGCCATTA TGGTGCTGTT CGTGTTTGTG GTGATGATGC TGAACCTGGG CAACGTCGAG
CAACAAGAGC GTGCCTGGCT GAAACCCAGC ATGTGGATAG GCCCCGGTTT ACTCGCTCTG
GTTCTGCTAT CAGTACTGAT CTATGCCATT AGCTCTGTCT CTGATCAGGG TATCAGCGGT
GAAATGGTGG ATGCCAAAGC CGTTGGGATC AGCTTATTTG GCCCTTATGT GTTGGCGGTT
GAGCTGGCGT CAATGTTGCT GTTGGCCGGT TTAGTGGTGG CGTTCCATAT CGGGCGTGAA
CATAAGCCGG GTGACGTGAT GGGTGCGAGT GATTCAGCGA AAAGAAAAAC GGAGGAACAA
GCATGA
 
Protein sequence
MEFAFYIAAL VAVVATIRVI THTNPVHALL YLIISLLAIS AVFFSLGAYF AGALEIIVYA 
GAIMVLFVFV VMMLNLGNVE QQERAWLKPS MWIGPGLLAL VLLSVLIYAI SSVSDQGISG
EMVDAKAVGI SLFGPYVLAV ELASMLLLAG LVVAFHIGRE HKPGDVMGAS DSAKRKTEEQ
A