Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1568 |
Symbol | |
ID | 6091128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1734186 |
End bp | 1734731 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641596638 |
Product | NADH dehydrogenase subunit J |
Protein accession | YP_001720314 |
Protein GI | 170023809 |
COG category | [C] Energy production and conversion |
COG ID | [COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.788173 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTTG CGTTTTATAT TGCAGCATTG GTGGCCGTGG TGGCGACGAT CCGCGTTATC ACTCACACCA ACCCGGTACA TGCGTTGCTG TACCTGATTA TCTCTTTGTT GGCTATTTCG GCGGTGTTCT TCTCGTTGGG GGCTTATTTT GCCGGTGCGC TGGAAATCAT CGTTTACGCG GGTGCCATTA TGGTGCTGTT CGTGTTTGTG GTGATGATGC TGAACCTGGG CAACGTCGAG CAACAAGAGC GTGCCTGGCT GAAACCCAGC ATGTGGATAG GCCCCGGTTT ACTCGCTCTG GTTCTGCTAT CAGTACTGAT CTATGCCATT AGCTCTGTCT CTGATCAGGG TATCAGCGGT GAAATGGTGG ATGCCAAAGC CGTTGGGATC AGCTTATTTG GCCCTTATGT GTTGGCGGTT GAGCTGGCGT CAATGTTGCT GTTGGCCGGT TTAGTGGTGG CGTTCCATAT CGGGCGTGAA CATAAGCCGG GTGACGTGAT GGGTGCGAGT GATTCAGCGA AAAGAAAAAC GGAGGAACAA GCATGA
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Protein sequence | MEFAFYIAAL VAVVATIRVI THTNPVHALL YLIISLLAIS AVFFSLGAYF AGALEIIVYA GAIMVLFVFV VMMLNLGNVE QQERAWLKPS MWIGPGLLAL VLLSVLIYAI SSVSDQGISG EMVDAKAVGI SLFGPYVLAV ELASMLLLAG LVVAFHIGRE HKPGDVMGAS DSAKRKTEEQ A
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