Gene YPK_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1560 
Symbol 
ID6089443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1724645 
End bp1725145 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content50% 
IMG OID641596630 
ProductNADH dehydrogenase subunit A 
Protein accessionYP_001720306 
Protein GI170023801 
COG category[C] Energy production and conversion 
COG ID[COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.548164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATGT CAACAACCAC TGAAATTATC GCTCATCACT GGGCGTTCGC TGTATTCCTC 
ATCGGCGCTG TTGGGCTGTG CGGTTTGATG CTTTTAGGTG CGTACTTCCT CGGGGGGAGA
GCCCAGGCTC GTGCCAAAAA CGTGCCTTAT GAATCAGGTA TAGATTCAGT AGGCTCTGCG
CGTATGCGCC TGTCCGCCAA GTTTTATCTG GTTGCGATGT TTTTCGTTAT TTTCGATGTT
GAAGCCCTCT ACCTTTATGC CTGGTCAATC TCCATTCGTG AGAGTGGCTG GATAGGCTTT
ATCGAAGCAG CCATTTTCAT TTTGGTGCTC TTGGCTGGTT TGTTTTATCT GGTGCGCATT
GGTGCCCTGG ATTGGACTCC TACACGTTCT AATCGCCGTG TGAGCAAACC CAGTACCGTG
AGATACGCCA GCAGTCATCC GCAAGATATA TCCCAAGAGC TTAGCGTTGC AGGTAGCCAG
CAAGCGAACG AATCCCGATA A
 
Protein sequence
MRMSTTTEII AHHWAFAVFL IGAVGLCGLM LLGAYFLGGR AQARAKNVPY ESGIDSVGSA 
RMRLSAKFYL VAMFFVIFDV EALYLYAWSI SIRESGWIGF IEAAIFILVL LAGLFYLVRI
GALDWTPTRS NRRVSKPSTV RYASSHPQDI SQELSVAGSQ QANESR