Gene YPK_1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1559 
Symbol 
ID6087404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1723035 
End bp1723967 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content47% 
IMG OID641596629 
ProductLysR family transcriptional regulator 
Protein accessionYP_001720305 
Protein GI170023800 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.30474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATG CAAATCGTCC GATAATTAAT CTCGACCTCG ATCTGCTTAG AACCTTTGTA 
GCTGTTGCTG ACTTAAATAC TTTTGCTGCT GCTGCTGCTG CGGTCTGCCG AACTCAGTCA
GCAGTTAGCC AACAAATGCA ACGGTTAGAA CAGTTAGTCG GTAAGGAGTT ATTTGCCCGC
CACGGGCGTA ACAAATTACT CACTGAACAT GGTCTCCAGC TACTTGGCTA TGCCAGAAAA
ATCTTACGTT TTAATGATGA GGCTTGTACA TCACTCATGT ACAGCAATAT GGAAGGGTCA
CTTATTATCG GCGCATCTGA TGATACTGCC GATACGTTAC TGCCTTTCTT GCTGAACCGA
GTGGCAACAC TATACCCTCG GCTGGCGATA GATGTGCGGG TAAAGCGCAG CCCATTTATC
GCTGATATGT TGAGCTCTGG TGAGGTGGAT TTGGCTATCA CAACCGCTAA GGTTGATAGC
CATCCCCATG TCATCTTGAG AACATCGCCC ACGCTTTGGT ATTGTTCGGT GGATTATCAG
TTCCAGCCCG GAGAGCCAGT CCCTTTGGTG GTGATGGATG AGCCCAGTCT GTACCGAGAG
ATGGCTATTG AGCACTTGAC TCAGGCGGGT GTTCCATGGC GTATTGCCTA CGTGGCCTCT
TCACTTTCTG CCATTCGAGC GGCAGTAAGA GCAGGGCTTG GGGTGACCGC CAGACCTATA
GAGATGATGA GCCCAGATTT AAGAGTGTTG GGCGAAACTG AAGGGTTGCC TGGTTTACCT
GAAACACGGT ATGTCTTATG TAAAGACAAA CAGTGTGACA ATGAACTGGC ACTTGCTATT
TTCAGTGCCT TACAAAACAG TTATCAGCAC ACCATGTCGT CAGAATCTTC ATTAATATTG
GATTCCGATT ATTTGACAGG TGATGAAGAT TAA
 
Protein sequence
MTNANRPIIN LDLDLLRTFV AVADLNTFAA AAAAVCRTQS AVSQQMQRLE QLVGKELFAR 
HGRNKLLTEH GLQLLGYARK ILRFNDEACT SLMYSNMEGS LIIGASDDTA DTLLPFLLNR
VATLYPRLAI DVRVKRSPFI ADMLSSGEVD LAITTAKVDS HPHVILRTSP TLWYCSVDYQ
FQPGEPVPLV VMDEPSLYRE MAIEHLTQAG VPWRIAYVAS SLSAIRAAVR AGLGVTARPI
EMMSPDLRVL GETEGLPGLP ETRYVLCKDK QCDNELALAI FSALQNSYQH TMSSESSLIL
DSDYLTGDED