Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1559 |
Symbol | |
ID | 6087404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1723035 |
End bp | 1723967 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641596629 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001720305 |
Protein GI | 170023800 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.30474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAATG CAAATCGTCC GATAATTAAT CTCGACCTCG ATCTGCTTAG AACCTTTGTA GCTGTTGCTG ACTTAAATAC TTTTGCTGCT GCTGCTGCTG CGGTCTGCCG AACTCAGTCA GCAGTTAGCC AACAAATGCA ACGGTTAGAA CAGTTAGTCG GTAAGGAGTT ATTTGCCCGC CACGGGCGTA ACAAATTACT CACTGAACAT GGTCTCCAGC TACTTGGCTA TGCCAGAAAA ATCTTACGTT TTAATGATGA GGCTTGTACA TCACTCATGT ACAGCAATAT GGAAGGGTCA CTTATTATCG GCGCATCTGA TGATACTGCC GATACGTTAC TGCCTTTCTT GCTGAACCGA GTGGCAACAC TATACCCTCG GCTGGCGATA GATGTGCGGG TAAAGCGCAG CCCATTTATC GCTGATATGT TGAGCTCTGG TGAGGTGGAT TTGGCTATCA CAACCGCTAA GGTTGATAGC CATCCCCATG TCATCTTGAG AACATCGCCC ACGCTTTGGT ATTGTTCGGT GGATTATCAG TTCCAGCCCG GAGAGCCAGT CCCTTTGGTG GTGATGGATG AGCCCAGTCT GTACCGAGAG ATGGCTATTG AGCACTTGAC TCAGGCGGGT GTTCCATGGC GTATTGCCTA CGTGGCCTCT TCACTTTCTG CCATTCGAGC GGCAGTAAGA GCAGGGCTTG GGGTGACCGC CAGACCTATA GAGATGATGA GCCCAGATTT AAGAGTGTTG GGCGAAACTG AAGGGTTGCC TGGTTTACCT GAAACACGGT ATGTCTTATG TAAAGACAAA CAGTGTGACA ATGAACTGGC ACTTGCTATT TTCAGTGCCT TACAAAACAG TTATCAGCAC ACCATGTCGT CAGAATCTTC ATTAATATTG GATTCCGATT ATTTGACAGG TGATGAAGAT TAA
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Protein sequence | MTNANRPIIN LDLDLLRTFV AVADLNTFAA AAAAVCRTQS AVSQQMQRLE QLVGKELFAR HGRNKLLTEH GLQLLGYARK ILRFNDEACT SLMYSNMEGS LIIGASDDTA DTLLPFLLNR VATLYPRLAI DVRVKRSPFI ADMLSSGEVD LAITTAKVDS HPHVILRTSP TLWYCSVDYQ FQPGEPVPLV VMDEPSLYRE MAIEHLTQAG VPWRIAYVAS SLSAIRAAVR AGLGVTARPI EMMSPDLRVL GETEGLPGLP ETRYVLCKDK QCDNELALAI FSALQNSYQH TMSSESSLIL DSDYLTGDED
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