| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1557 |
|---|
| Symbol | |
|---|
| ID | 6089268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 1720222 |
|---|
| End bp | 1720815 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641596627 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001720303 |
|---|
| Protein GI | 170023798 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1896] Predicted hydrolases of HD superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCACT TCTTCGCTCA TCTTTCCCGC CTGAAACTCA TCAACCGCTG GCCGCTGATG
CGTAACGTTC GCACTGAAAA TGTGTCAGAA CACAGCTTGC AGGTCGCGTT TGTCGCTCAT
GCATTAGCCA TCATTAAGAA CCGTAAATTT AATGGTAATC TTAATGCCGA ACGTATCGCC
CTACTGGCGA TGTATCACGA TGCCAGCGAA GTGATTACCG GGGATTTGCC AACCCCTATC
AAATACCACA ATCCCAAAAT TGCACATGAA TACAAAAAAA TAGAGAAAGT TGCTCAACAA
AAACTGATCG AAATGCTGCC CAAAGAGTTA CAACATGATT TCCGCTGTCT ACTGGATGAG
CATTATTACA GCGAAGAGGA GAAAGCGCTG GTTAAACAAG CCGATGCTCT GTGTGCGTAC
CTGAAATGTC TGGAGGAATT ATCCGCCGGT AATAATGAAT TTATTCAGGC TAAAGCCCGG
TTGGAGAAGA CGTTGGCAAT ACGCCAAAGC CCAGAGATGG ATTACTTTAT GGCAGTCTTT
GTGCCAAGTT TTAGTTTATC TCTGGATGAA ATCAGCCTCG ATTCACTGGA TTGA
|
|---|
| Protein sequence | MSHFFAHLSR LKLINRWPLM RNVRTENVSE HSLQVAFVAH ALAIIKNRKF NGNLNAERIA
LLAMYHDASE VITGDLPTPI KYHNPKIAHE YKKIEKVAQQ KLIEMLPKEL QHDFRCLLDE
HYYSEEEKAL VKQADALCAY LKCLEELSAG NNEFIQAKAR LEKTLAIRQS PEMDYFMAVF
VPSFSLSLDE ISLDSLD
|
|---|
| |