Gene YPK_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1553 
Symbol 
ID6088346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp1716069 
End bp1716563 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content47% 
IMG OID641596623 
Producthypothetical protein 
Protein accessionYP_001720299 
Protein GI170023794 
COG category[S] Function unknown 
COG ID[COG3013] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.926167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATGA CAAACGCCCA ACGACTGATT CTGTCAAATC AGTACAAAAT GATGACCATG 
TTGGATCCGG AAAATGCAGA GCGTTATCGT CGCCAGCAAA CCATTGTTGA GCGGGGATTT 
GGTCTGCAAA TGCGTGAGTT GGATCGCGAC TTTGGTGAGA TGAGCGAAGA TACTTGCCGT 
ACTATCATTA ATATCATGGA GATGCATCAC GCTTTACAGG TCTCTTGGGG GAACTTGAAA 
GAGAAGCAGG ACCTGGATGA ACGCCGTATT TCATTCCTCG GTTTTGATGC GGCCACGGAA 
TCCCGTTATC TCAGTTATGT CCGGTTTATG GTCAATACGG AAGGGCGCTA TACCCACTTT 
GATTCAGGTA CCCACGGTTT CAACTCCCAA ACGCCTATGT GGGATAAATA CCAGCGGATG 
CTGGCTATTT GGCAATCATG TCCACGGCAA TATCATTTGA GCGCCGTCGA AATTTCGCAA 
ATTATTAATG CCTGA
 
Protein sequence
MDMTNAQRLI LSNQYKMMTM LDPENAERYR RQQTIVERGF GLQMRELDRD FGEMSEDTCR 
TIINIMEMHH ALQVSWGNLK EKQDLDERRI SFLGFDAATE SRYLSYVRFM VNTEGRYTHF 
DSGTHGFNSQ TPMWDKYQRM LAIWQSCPRQ YHLSAVEISQ IINA