| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1546 |
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| Symbol | |
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| ID | 6089778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 1707525 |
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| End bp | 1708781 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641596616 |
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| Product | PTS system ascorbate-specific transporter subunit IIC |
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| Protein accession | YP_001720292 |
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| Protein GI | 170023787 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3037] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000111048 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTCT TTCGTTTCTT AATGAGTGAT GTGCTTTCTG AACCCGCAAT ACTGGTCGGT
CTGATCGCTT TGATTGGCCT TATTGCCCAG AAAAAACCGG TGACTGAATG TATTAAAGGC
ACCGTCAAAA CCATTATGGG TTTTGTGATT TTGGGTGCAG GCGCTGGCCT GGTGGTTTCA
TCTCTGGGTG ATTTTGCCAA TATCTTCCAA CAGGCTTTCG GTATTCAGGG CGTAGTGCCA
AATAACGAAG CTATTGTTTC TGTGGCACAG AAGAGTTTCG GCAAAGAAAT GGCGATGATT
ATGTTCTTCG CTATGGTGAT CAATATCCTG ATTGCCCGTT TTACGCCGTG GAAATTTATC
TTCCTGACCG GTCACCACAC GCTGTTTATG TCCATGATGG TGGCCGTGAT TCTGGCAACT
GCTGGGCTAA GTGGCATGAT GCTGATTGCC ATCGGTTCCG TGGTTGTTGG GGTAGCGATG
GTCTTCTTCC CTGCCATTGC CCACCCTTAC ATGAAGAAGG TGACAGGATC TGATGATGTA
GCCATCGGTC ACTTCTCTAC CCTCTCCTAT GTATTGGCTG GTTTTATCGG CAGTAAGTTT
GGTAATAAAG AACATTCGAC TGAAGACATG AACGTGCCGA AAAGTCTGTT GTTCTTGCGT
GATACACCGG TCGCGATCTC CTTTACCATG TGTATCATTT TTGTCGTTAC CTGCCTGTTT
GCCGGGCCGG AAGTGGTGAA AAGCCTGAGT GGCGGTAAAA ACTGGTTCAT GTTCTCATTG
ATGCAATCCA TCACCTTTGC CGCAGGGGTT TATATTATTC TGCAGGGTGT TCGGATGGTG
ATTGCCGAGA TCGTGCCTGC TTTTAAAGGG ATTTCAGACA AGTTAGTGCC TAATGCAAAA
CCTGCGTTAG ATTGCCCGGT TGTCTTCCCT TACGCACCCA ATGCGGTACT GGTTGGCTTC
CTGAGCAGCT TTGCCGCTGG CCTGATCGGT ATGTTCGCGT TGTATTTGTT GAATATGACC
GTGATCATCC CAGGCGTCGT CCCTCACTTC TTCGTAGGTG CTGCCGCAGG GGTGTTTGGT
AATGCTACCG GCGGGCGTCG CGGGGCGATT CTCGGTGCAT TTGCTCAAGG TCTGTTAATT
ACCTTCCTGC CCGTCTTCCT GCTGCCAGTC TTAGGCGATA TTGGTTTTGC CAATACCACA
TTTAGTGATG CAGATTTTGG TGCGCTGGGT ATTTTACTGG GGATTATCGT TCGATAA
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| Protein sequence | MDFFRFLMSD VLSEPAILVG LIALIGLIAQ KKPVTECIKG TVKTIMGFVI LGAGAGLVVS
SLGDFANIFQ QAFGIQGVVP NNEAIVSVAQ KSFGKEMAMI MFFAMVINIL IARFTPWKFI
FLTGHHTLFM SMMVAVILAT AGLSGMMLIA IGSVVVGVAM VFFPAIAHPY MKKVTGSDDV
AIGHFSTLSY VLAGFIGSKF GNKEHSTEDM NVPKSLLFLR DTPVAISFTM CIIFVVTCLF
AGPEVVKSLS GGKNWFMFSL MQSITFAAGV YIILQGVRMV IAEIVPAFKG ISDKLVPNAK
PALDCPVVFP YAPNAVLVGF LSSFAAGLIG MFALYLLNMT VIIPGVVPHF FVGAAAGVFG
NATGGRRGAI LGAFAQGLLI TFLPVFLLPV LGDIGFANTT FSDADFGALG ILLGIIVR
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