Gene YPK_1544 details

Gene Information

• Locus tag: YPK_1544
• ID: 6087468
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 1706087
• End bp: 1706638
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641596614
• Product: phosphodiesterase
• Protein accession: YP_001720290
• Protein GI: 170023785
• COG category: [R] General function prediction only
• COG ID: [COG0622] Predicted phosphoesterase
• TIGRFAM ID: [TIGR00040] phosphoesterase, MJ0936 family

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000000690734
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTTAA TGTTTGCTTC TGACCTGCAT GGTTCGTTAC CGGCCACGGA ACGTGTTTTG 
GCGATCTTTG ATCACAGCGG TGCTCAATGG CTGGTACTAC TGGGTGATTT ACTTAACCAC 
GGGCCGCGCA ATGCATTACC TGAGGGGTAT CAACCTGCAG CGGTGGCGGA GTCTCTTAAT 
GCCTACAAGG ATAGCATTAT TGCCGTGCGC GGCAATTGCG ACAGTGAAGT CGATCAAATG 
CTACTTCAAT TCCCCATCAT GGCGGGTTGG CAGCAGATTA TTATGCCTGA AACACGTTTA 
TTCCTGACCC ATGGTCACCT TTATCATCCC GGTGCGCTTC CTCCATTGCG TCATGGGGAT 
GTCCTGGCTT ATGGTCATAC CCACCTGCCA CAAGCACAAT GGCAAGGTGA TATCATCTGT 
TTTAACCCAG GTTCCGTGAG TATCCCAAAG GGGGAATACC CGGCGAGCTA TGGCATGTTG 
GACAAGGGTG TTTTGCAGGT TCTTACCCTA CAAGGTGATG AAATTGTCGC CCGATTGGCA 
CTAAAAAATT AA 

 

Protein sequence

MKLMFASDLH GSLPATERVL AIFDHSGAQW LVLLGDLLNH GPRNALPEGY QPAAVAESLN 
AYKDSIIAVR GNCDSEVDQM LLQFPIMAGW QQIIMPETRL FLTHGHLYHP GALPPLRHGD 
VLAYGHTHLP QAQWQGDIIC FNPGSVSIPK GEYPASYGML DKGVLQVLTL QGDEIVARLA 
LKN