Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1541 |
Symbol | |
ID | 6089937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1703024 |
End bp | 1703821 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641596611 |
Product | histidine/lysine/arginine/ornithine transporter subunit |
Protein accession | YP_001720287 |
Protein GI | 170023782 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4598] ABC-type histidine transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.920327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAATA CGTCCTATAT TAAAAATGCG GAAACAAAAC TTTCCGTGAC GGAGCTGCAT AAGCATTATG GGGAGCATGA GGTATTAAAA GGTGTTTCGC TCTCTGCCAA CGCGGGGGAT GTTATTTCCA TTATTGGTTC ATCCGGTTCA GGGAAAAGTA CATTTTTACG TTGCATTAAC TTTCTGGAAA AACCCAGTGA AGGATCGATA AGCGTGAATA ATCAGGTTAT CCGCTTGGTA CGGGATAGCG ATGGTCAGTT AAAAGTCTTC GATAAAAAAC AACTGCAATT ATTGCGCACC CGGTTAACGA TGGTCTTCCA ACACTTTAAT CTGTGGAGTC ACATGACGGT ATTAGAAAAC GTGATGGAGG CACCGGTTCA AGTGCTGGGA TTAAGTAAAT CGGTGGCGAA AGAGCGTGCA ATTTTGTATC TGGATAAAGT CGGTATTGAT GAACGGGCGC GGGCCAAATA TCCCGTACAT CTCTCTGGGG GGCAGCAACA GCGTGTTTCT ATTGCACGAG CACTGGCCAT GGAACCAGAT GTATTGCTGT TTGATGAACC CACTTCGGCG CTGGATCCTG AGTTGGTCGG TGAAGTGCTA CGTATTATGC AAAAGTTGGC GGAAGAGGGG AAAACTATGG TGGTGGTCAC GCACGAAATG GAATTTGCCC GCCATGTTTC CAGCCATGTT ATTTTCTTAC ATAAAGGGGT CATTGAAGAG GAAGGGCCAC CCGCTGAGCT TTTCGGTAAC CCTAAAAGCC CACGTTTACA GCAGTTTCTT TCTGGCTCAC TGAAATAA
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Protein sequence | MTNTSYIKNA ETKLSVTELH KHYGEHEVLK GVSLSANAGD VISIIGSSGS GKSTFLRCIN FLEKPSEGSI SVNNQVIRLV RDSDGQLKVF DKKQLQLLRT RLTMVFQHFN LWSHMTVLEN VMEAPVQVLG LSKSVAKERA ILYLDKVGID ERARAKYPVH LSGGQQQRVS IARALAMEPD VLLFDEPTSA LDPELVGEVL RIMQKLAEEG KTMVVVTHEM EFARHVSSHV IFLHKGVIEE EGPPAELFGN PKSPRLQQFL SGSLK
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