Gene YPK_1541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1541 
Symbol 
ID6089937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1703024 
End bp1703821 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content46% 
IMG OID641596611 
Producthistidine/lysine/arginine/ornithine transporter subunit 
Protein accessionYP_001720287 
Protein GI170023782 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4598] ABC-type histidine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.920327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAATA CGTCCTATAT TAAAAATGCG GAAACAAAAC TTTCCGTGAC GGAGCTGCAT 
AAGCATTATG GGGAGCATGA GGTATTAAAA GGTGTTTCGC TCTCTGCCAA CGCGGGGGAT
GTTATTTCCA TTATTGGTTC ATCCGGTTCA GGGAAAAGTA CATTTTTACG TTGCATTAAC
TTTCTGGAAA AACCCAGTGA AGGATCGATA AGCGTGAATA ATCAGGTTAT CCGCTTGGTA
CGGGATAGCG ATGGTCAGTT AAAAGTCTTC GATAAAAAAC AACTGCAATT ATTGCGCACC
CGGTTAACGA TGGTCTTCCA ACACTTTAAT CTGTGGAGTC ACATGACGGT ATTAGAAAAC
GTGATGGAGG CACCGGTTCA AGTGCTGGGA TTAAGTAAAT CGGTGGCGAA AGAGCGTGCA
ATTTTGTATC TGGATAAAGT CGGTATTGAT GAACGGGCGC GGGCCAAATA TCCCGTACAT
CTCTCTGGGG GGCAGCAACA GCGTGTTTCT ATTGCACGAG CACTGGCCAT GGAACCAGAT
GTATTGCTGT TTGATGAACC CACTTCGGCG CTGGATCCTG AGTTGGTCGG TGAAGTGCTA
CGTATTATGC AAAAGTTGGC GGAAGAGGGG AAAACTATGG TGGTGGTCAC GCACGAAATG
GAATTTGCCC GCCATGTTTC CAGCCATGTT ATTTTCTTAC ATAAAGGGGT CATTGAAGAG
GAAGGGCCAC CCGCTGAGCT TTTCGGTAAC CCTAAAAGCC CACGTTTACA GCAGTTTCTT
TCTGGCTCAC TGAAATAA
 
Protein sequence
MTNTSYIKNA ETKLSVTELH KHYGEHEVLK GVSLSANAGD VISIIGSSGS GKSTFLRCIN 
FLEKPSEGSI SVNNQVIRLV RDSDGQLKVF DKKQLQLLRT RLTMVFQHFN LWSHMTVLEN
VMEAPVQVLG LSKSVAKERA ILYLDKVGID ERARAKYPVH LSGGQQQRVS IARALAMEPD
VLLFDEPTSA LDPELVGEVL RIMQKLAEEG KTMVVVTHEM EFARHVSSHV IFLHKGVIEE
EGPPAELFGN PKSPRLQQFL SGSLK