| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1538 |
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| Symbol | |
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| ID | 6089870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1700733 |
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| End bp | 1701515 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641596608 |
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| Product | cationic amino acid ABC transporter, periplasmic binding protein |
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| Protein accession | YP_001720284 |
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| Protein GI | 170023779 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA AGCTGCGAGT TCTTCCTTTG GTATTCGCAT TCGCTGCGGC TAGTAGTGCT
TTTGCCGCCA TTCCAAAAGA GATCAAAATT GGCACAGATC CGACTTACGC CCCTTTTGAA
TCGAAAAACT CGAGTGGTGA ATTAGTGGGT TTTGATATCG ATATCGCGAA GGAGTTATGC
AAACGTATAG ATACCAAATG TACTTTTGTT GAAAGTGACT TTGATGCGCT AATCCCGTCG
CTGAAAGCGA AAAAAGTCGA TGCCATTATC TCCTCTCTCT CCATTACTGA AAAACGTCAA
AAAGAGATTG CCTTCACCGA TAAACTCTTT GCCGCCAATT CCCGTTTAAT TGCTGCTAAA
GGTAGCACTA TTGAGCCGAC ACTGGTGGCA TTAAAAGGTA AGCGCGTGGG GGTGTTACAA
GGGTCGACTC AGGAAGCTTT TGCCAATGCT GAGTGGCAGC CAAAAGGCAT TGATGTTGTT
GCTTATCAAA ATCAGGATCT GATTTATGCA GATCTGGCCT CTGGTCGTAT TGATGCGGCT
TTCCAGGATG AAGTGGCCGC CAGTGAAGGT TTCCTAAAAC AACCTGTGGG TAAAGATTAT
ATCTTTGCCG GTCCATCAGT AAAGAATGAT CAATTCTTCG GTGTAGGGAC TGGTATGGGG
TTGCGCAAAG CCGATGTTGA GCTGAAAGAG GCGTTAAATA AAGCGTTTGC TGAAATGCGT
AATGACGGCA CCTACGATCA ATTTGCCAAA AAATACTTCG ATTTTGATGT TTACGGTGAT
TAA
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| Protein sequence | MNKKLRVLPL VFAFAAASSA FAAIPKEIKI GTDPTYAPFE SKNSSGELVG FDIDIAKELC
KRIDTKCTFV ESDFDALIPS LKAKKVDAII SSLSITEKRQ KEIAFTDKLF AANSRLIAAK
GSTIEPTLVA LKGKRVGVLQ GSTQEAFANA EWQPKGIDVV AYQNQDLIYA DLASGRIDAA
FQDEVAASEG FLKQPVGKDY IFAGPSVKND QFFGVGTGMG LRKADVELKE ALNKAFAEMR
NDGTYDQFAK KYFDFDVYGD
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